RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 CEP95Q96GE4 821 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 KIF2CQ99661 725 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 ADGRA2Q96PE1 1338 aa6.35□□□□□ -1.39
RFX3-212ENST00000617270 RASSF9O75901 435 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 CAPN1P07384 714 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ENO3P13929 434 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 PSMA3P25788 255 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 PLOD1Q02809 727 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 ALCAMQ13740 583 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 NCAPHQ15003 741 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ANKMY2Q8IV38 441 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 JADE3Q92613 823 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 GCOM2Q9BZD3 368 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 SMARCAD1Q9H4L7 1026 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 TRPC7Q9HCX4 862 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 DDX5P17844 614 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 BAG6P46379 1132 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 KIF23Q02241 960 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 C1orf54Q8WWF1 131 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 DTNBP1Q96EV8 351 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 DIS3Q9Y2L1 958 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 PCDHB6Q9Y5E3 794 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 DENND4BO75064 1496 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 RPRD2Q5VT52 1461 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 TARSL2A2RTX5 802 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 RGS5O15539 181 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 TLR2O60603 784 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 HIST1H2AGP0C0S8 130 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 PYGMP11217 842 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 HIST1H2ADP20671 130 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 NUP62P37198 522 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 LRRC63Q05C16 580 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 TP53BP2Q13625 1128 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 CC2D1AQ6P1N0 951 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 USP17L2Q6R6M4 530 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 BBS7Q8IWZ6 715 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 SCFD1Q8WVM8 642 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 PPP1R14AQ96A00 147 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ZNF668Q96K58 619 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 HIST1H2AHQ96KK5 128 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 HIST1H2AJQ99878 128 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 H2AFJQ9BTM1 129 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 KLHL11Q9NVR0 708 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 GID8Q9NWU2 228 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 SERPINB13Q9UIV8 391 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 hCG_1984214I3L0E3 225 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 CLDN3O15551 220 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 DGKIO75912 1065 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 UBTFL6P0CB48 400 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 GTF2H3Q13889 308 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 SLC44A4Q53GD3 710 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 FAM102AQ5T9C2 384 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 GAS2L3Q86XJ1 694 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ZNF713Q8N859 430 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 TADA1Q96BN2 335 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 PRMT1Q99873 361 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.34□□□□□ -1.39
RFX3-212ENST00000617270 APOL5Q9BWW9 433 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 MRPL1Q9BYD6 325 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 PCF11O94913 1555 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 KDM5BQ9UGL1 1544 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 YEATS2Q9ULM3 1422 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ABCB11O95342 1321 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 TRIM49BA6NDI0 452 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 NR3C1P04150 777 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 CPB1P15086 417 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 SESN2P58004 480 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 RHPN2Q8IUC4 686 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 VPS50Q96JG6 964 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 CCT7Q99832 543 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 FAM213AQ9BRX8 229 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 KLC4Q9NSK0 619 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 UTP6Q9NYH9 597 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 PNMA8BQ9ULN7 279 aaPredicted RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 XDHP47989 1333 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 GPC3P51654 580 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ABCE1P61221 599 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 RPS7P62081 194 aaKnown RBP6.34□□□□□ -1.39
RFX3-212ENST00000617270 BFSP2Q13515 415 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 SGO1Q5FBB7 561 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 LONP2Q86WA8 852 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 YAF2Q8IY57 180 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 ATP6V1G3Q96LB4 118 aa6.34□□□□□ -1.39
RFX3-212ENST00000617270 PHKA2P46019 1235 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 PDAP1Q13442 181 aaKnown RBP6.34□□□□□ -1.4
RFX3-212ENST00000617270 TERF2Q15554 542 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 TRIP10Q15642 601 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 IZUMO3Q5VZ72 239 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 AHI1Q8N157 1196 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 KRT78Q8N1N4 520 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 CLMNQ96JQ2 1002 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 NPHS2Q9NP85 383 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 CEP72Q9P209 647 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.4
RFX3-212ENST00000617270 URB2Q14146 1524 aaKnown RBP6.33□□□□□ -1.4
RFX3-212ENST00000617270 SLC16A4O15374 487 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 PRKAB2O43741 272 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 LCP1P13796 627 aa6.33□□□□□ -1.4
RFX3-212ENST00000617270 GPC5P78333 572 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms