RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ACSL3O95573 720 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 GPC3P51654 580 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 OR6B2Q6IFH4 312 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 RDM1Q8NG50 284 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 AIPL1Q9NZN9 384 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 FAM169AQ9Y6X4 670 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 IGSF9BQ9UPX0 1349 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 HMGB1P1B2RPK0 211 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 H7C0C1 242 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 P4HA2O15460 535 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 ATP5OP48047 213 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 KCNMA1Q12791 1236 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 SETDB1Q15047 1291 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 GKAP1Q5VSY0 366 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 CCDC137Q6PK04 289 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 C1orf186Q6ZWK4 172 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 DDX42Q86XP3 938 aaKnown RBP eCLIP14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 POP1Q99575 1024 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 SYNPO2Q9UMS6 1093 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 MYH2Q9UKX2 1941 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 RCCD1A6NED2 376 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 M0R2N6 131 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 PIK3CDO00329 1044 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 VWA5AO00534 786 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 C4orf19Q8IY42 314 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 FGFBP2Q9BYJ0 223 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 RASGRF2O14827 1237 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 PRLRP16471 622 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 CHRNA3P32297 505 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 ARSHQ5FYA8 562 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 BSPRYQ5W0U4 402 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 CASC4Q6P4E1 433 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 C1orf54Q8WWF1 131 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 C2orf40Q9H1Z8 148 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 FBXL5Q9UKA1 691 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 HPCAL4Q9UM19 191 aa14.11□□□□□ -0.15
PPP4R3B-206ENST00000616407 HLA-DRAP01903 254 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 PHKA2P46019 1235 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 LIG3P49916 1009 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 EFNA5P52803 228 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 WDR93Q6P2C0 686 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 CHST13Q8NET6 341 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 TBK1Q9UHD2 729 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 COL18A1P39060 1754 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 SYNJ2BP-COX16A0A087WUM0 186 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 ANKRD65E5RJM6 399 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 F8VZ95 297 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 PRKCBP05771 671 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 CATSPER4Q7RTX7 472 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 MAP7D3Q8IWC1 876 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 FAM149B1Q96BN6 582 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 TRIM51Q9BSJ1 452 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 COX16Q9P0S2 106 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 ZSCAN20P17040 1043 aaPredicted RBP14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 PSMA2P25787 234 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 EIF3BP55884 814 aaKnown RBP14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 P3H4Q92791 437 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 TSNARE1Q96NA8 513 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 HSD17B14Q9BPX1 270 aa14.1□□□□□ -0.15
PPP4R3B-206ENST00000616407 FRMPD4Q14CM0 1322 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 ONECUT3O60422 494 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 COMTP21964 271 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 SNRPFP62306 86 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 DGKZQ13574 1117 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 CALR3Q96L12 384 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 MED10Q9BTT4 135 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 OSGEPQ9NPF4 335 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 SUCLA2Q9P2R7 463 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 USP54Q70EL1 1684 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 NDC80O14777 642 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 NCOA4Q13772 614 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 SEZ6Q53EL9 994 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 KCTD6Q8NC69 237 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 CELF4Q9BZC1 486 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 C17orf75Q9HAS0 396 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 INTUQ9ULD6 942 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 TISP43B9A030 160 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 SGPL1O95470 568 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 OATP04181 439 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 MYO1EQ12965 1108 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 FASTKD5Q7L8L6 764 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 CEP57Q86XR8 500 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 MORC4Q8TE76 937 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 REXO2Q9Y3B8 237 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 RRP15Q9Y3B9 282 aaKnown RBP14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 NUP188Q5SRE5 1749 aa14.09□□□□□ -0.15
PPP4R3B-206ENST00000616407 CAPN9O14815 690 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms