RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 LIMD1Q9UGP4 676 aa21.03■□□□□ 0.96
CDX1-202ENST00000616154 GIT1Q9Y2X7 761 aa21.03■□□□□ 0.96
CDX1-202ENST00000616154 HES2Q9Y543 173 aa21.03■□□□□ 0.96
CDX1-202ENST00000616154 USP34Q70CQ2 3546 aa21.02■□□□□ 0.96
CDX1-202ENST00000616154 SPDYE4A6NLX3 237 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 CD2BP2O95400 341 aaKnown RBP21.02■□□□□ 0.95
CDX1-202ENST00000616154 XRCC6P12956 609 aaKnown RBP eCLIP21.02■□□□□ 0.95
CDX1-202ENST00000616154 U2AF2P26368 475 aaKnown RBP eCLIP21.02■□□□□ 0.95
CDX1-202ENST00000616154 TXKP42681 527 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 SCNN1GP51170 649 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 NOSTRINQ8IVI9 506 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 HACE1Q8IYU2 909 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 FAM184AQ8NB25 1140 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 CMASQ8NFW8 434 aaPredicted RBP21.02■□□□□ 0.95
CDX1-202ENST00000616154 ACSF2Q96CM8 615 aaPredicted RBP21.02■□□□□ 0.95
CDX1-202ENST00000616154 TMX3Q96JJ7 454 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 ZFP42Q96MM3 310 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 TMEM60Q9H2L4 133 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 MIOSQ9NXC5 875 aa21.02■□□□□ 0.95
CDX1-202ENST00000616154 ZMYM2Q9UBW7 1377 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 C2CD2LO14523 706 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 ADH1AP07327 375 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 GLUD2P49448 558 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 KIAA0319Q5VV43 1072 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 OTOP3Q7RTS5 596 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 TAS1R1Q7RTX1 841 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 TRIM6Q9C030 488 aaPredicted RBP21.01■□□□□ 0.95
CDX1-202ENST00000616154 POLR3FQ9H1D9 316 aaPredicted RBP21.01■□□□□ 0.95
CDX1-202ENST00000616154 NXF3Q9H4D5 531 aaKnown RBP21.01■□□□□ 0.95
CDX1-202ENST00000616154 RXFP1Q9HBX9 757 aa21.01■□□□□ 0.95
CDX1-202ENST00000616154 TEX28O15482 410 aa21■□□□□ 0.95
CDX1-202ENST00000616154 NR1I2O75469 434 aa21■□□□□ 0.95
CDX1-202ENST00000616154 SLC27A1Q6PCB7 646 aa21■□□□□ 0.95
CDX1-202ENST00000616154 PIGOQ8TEQ8 1089 aa21■□□□□ 0.95
CDX1-202ENST00000616154 APOL6Q9BWW8 343 aa21■□□□□ 0.95
CDX1-202ENST00000616154 RHOBTB2Q9BYZ6 727 aa21■□□□□ 0.95
CDX1-202ENST00000616154 MAN1C1Q9NR34 630 aa21■□□□□ 0.95
CDX1-202ENST00000616154 KIF3AQ9Y496 699 aa21■□□□□ 0.95
CDX1-202ENST00000616154 A0A1B0GUA9 196 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 POTEMA6NI47 508 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 B4GALT5O43286 388 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 GALR2O43603 387 aaPredicted RBP20.99■□□□□ 0.95
CDX1-202ENST00000616154 DSG1Q02413 1049 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 ELMSAN1Q6PJG2 1045 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 CYP26C1Q6V0L0 522 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 GSTCDQ8NEC7 633 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 SNX21Q969T3 373 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 COLEC11Q9BWP8 271 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 CHST7Q9NS84 486 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 DPP7Q9UHL4 492 aa20.99■□□□□ 0.95
CDX1-202ENST00000616154 DOCK8Q8NF50 2099 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 F8W810 466 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 USO1O60763 962 aaKnown RBP20.98■□□□□ 0.95
CDX1-202ENST00000616154 NPTXRO95502 500 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 GLUD1P00367 558 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 C1RP00736 705 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 SPATA31C1P0DKV0 1188 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 MCM7P33993 719 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 TMEM105Q8N8V8 129 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 PRIMPOLQ96LW4 560 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 TUFT1Q9NNX1 390 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 FAM86C1Q9NVL1 165 aa20.98■□□□□ 0.95
CDX1-202ENST00000616154 ZFHX2Q9C0A1 2572 aaPredicted RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 A0A087WWV3 80 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 AKAP5P24588 427 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 GRIK3Q13003 919 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 CDCA2Q69YH5 1023 aaPredicted RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 CDR2LQ86X02 465 aaPredicted RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 GPR65Q8IYL9 337 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 C4orf32Q8N8J7 132 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 MCPH1Q8NEM0 835 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 HDAC7Q8WUI4 952 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 ATOH1Q92858 354 aaPredicted RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 GPRC5CQ9NQ84 441 aa20.97■□□□□ 0.95
CDX1-202ENST00000616154 PRMT7Q9NVM4 692 aaPredicted RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
CDX1-202ENST00000616154 LRRIQ4A6NIV6 560 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 PAPLNO95428 1278 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 OR52Z1P0C646 297 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 TDGQ13569 410 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 TTC38Q5R3I4 469 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 ASTLQ6HA08 431 aaPredicted RBP20.96■□□□□ 0.95
CDX1-202ENST00000616154 FUT10Q6P4F1 479 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 CATSPER3Q86XQ3 398 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 POLR3CQ9BUI4 534 aaPredicted RBP20.96■□□□□ 0.95
CDX1-202ENST00000616154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.96■□□□□ 0.95
CDX1-202ENST00000616154 MYO15AQ9UKN7 3530 aa20.96■□□□□ 0.95
CDX1-202ENST00000616154 CCDC195A0A1B0GUA6 201 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 MED24O75448 989 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 TOB1P50616 345 aaPredicted RBP20.95■□□□□ 0.94
CDX1-202ENST00000616154 CLCN5P51795 746 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 FAM187BQ17R55 369 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 USP41Q3LFD5 358 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 NACC1Q96RE7 527 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 GPR62Q9BZJ7 368 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 MFSD1Q9H3U5 465 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 FZD8Q9H461 694 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 KCNK12Q9HB15 430 aa20.95■□□□□ 0.94
CDX1-202ENST00000616154 WDR6Q9NNW5 1121 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms