RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 FAM3CQ92520 227 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 DNASE1L2Q92874 299 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 PGBD1Q96JS3 809 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 FAM193BQ96PV7 902 aaPredicted RBP7.77□□□□□ -1.17
MUC1-227ENST00000615517 GPR62Q9BZJ7 368 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 FNIP2Q9P278 1114 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 DNMT3BQ9UBC3 853 aaKnown RBP7.77□□□□□ -1.17
MUC1-227ENST00000615517 FBXW11Q9UKB1 542 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 PIN4Q9Y237 131 aaKnown RBP7.77□□□□□ -1.17
MUC1-227ENST00000615517 PCDHB2Q9Y5E7 798 aa7.77□□□□□ -1.17
MUC1-227ENST00000615517 A0A087WZ62 844 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 C4orf47A7E2U8 309 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 HYAL3O43820 417 aaPredicted RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 HNRNPA1P09651 372 aaKnown RBP eCLIP7.76□□□□□ -1.17
MUC1-227ENST00000615517 SKIP12755 728 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 TMOD1P28289 359 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 KIF5BP33176 963 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 OR1G1P47890 313 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 RAB27AP51159 221 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 PTGDRQ13258 359 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 GRM2Q14416 872 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 SLC5A9Q2M3M2 681 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 COL28A1Q2UY09 1125 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 CEP55Q53EZ4 464 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 Q6ZS52 159 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 KBTBD6Q86V97 674 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 WDR5BQ86VZ2 330 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 ZNF710Q8N1W2 664 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 URGCPQ8TCY9 931 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 RRP36Q96EU6 259 aaKnown RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 MCRS1Q96EZ8 462 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 LOXL4Q96JB6 756 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 SCLT1Q96NL6 688 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 FDXACB1Q9BRP7 624 aaPredicted RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 SPZ1Q9BXG8 430 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 GCOM2Q9BZD3 368 aaPredicted RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 CNNM2Q9H8M5 875 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 RSAD1Q9HA92 442 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 RBM12Q9NTZ6 932 aaKnown RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 MIOSQ9NXC5 875 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 CACNA2D2Q9NY47 1150 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 ANKFY1Q9P2R3 1169 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 KLK13Q9UKR3 277 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 FARP1Q9Y4F1 1045 aaPredicted RBP7.76□□□□□ -1.17
MUC1-227ENST00000615517 NEUROG3Q9Y4Z2 214 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 MYO16Q9Y6X6 1858 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 ZNF462Q96JM2 2506 aa7.76□□□□□ -1.17
MUC1-227ENST00000615517 PTPRBP23467 1997 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 hCG_1642624A0A1W2PR95 340 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 ZNF862O60290 1169 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 PLEKHA8P1O95397 391 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 C8AP07357 584 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 MPLP40238 635 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 DSC1Q08554 894 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 PPM1LQ5SGD2 360 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 UBXN11Q5T124 520 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 PRSS55Q6UWB4 352 aaPredicted RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 PROSER1Q86XN7 944 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 MAP4K3Q8IVH8 894 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 CMTR1Q8N1G2 835 aaKnown RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 SRBD1Q8N5C6 995 aaKnown RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 ELSPBP1Q96BH3 223 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 PGBD4Q96DM1 585 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 CLSTN3Q9BQT9 956 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 EDEM2Q9BV94 578 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 ZNF334Q9HCZ1 680 aaPredicted RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.75□□□□□ -1.17
MUC1-227ENST00000615517 KANSL3Q9P2N6 904 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 GABBR1Q9UBS5 961 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 KCNH3Q9ULD8 1083 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 POLIQ9UNA4 740 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 CEP131Q9UPN4 1083 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 MSRB2Q9Y3D2 182 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 PIAS3Q9Y6X2 628 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 PTPRDP23468 1912 aa7.75□□□□□ -1.17
MUC1-227ENST00000615517 TNRC6BQ9UPQ9 1833 aaKnown RBP7.75□□□□□ -1.17
MUC1-227ENST00000615517 SPTA1P02549 2419 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 KIAA1549LQ6ZVL6 1849 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 FAM86B1E9PN63 330 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 IFIT3O14879 490 aaKnown RBP7.74□□□□□ -1.17
MUC1-227ENST00000615517 ADAM12O43184 909 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 FAM86B2P0C5J1 330 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 CEACAM1P13688 526 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 CEBPBP17676 345 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 SDSP20132 328 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 CSRP1P21291 193 aaKnown RBP7.74□□□□□ -1.17
MUC1-227ENST00000615517 SFPQP23246 707 aaKnown RBP eCLIP7.74□□□□□ -1.17
MUC1-227ENST00000615517 CCNE1P24864 410 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 SMARCA1P28370 1054 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 HOXA6P31267 233 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 HOXA9P31269 272 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 PXNP49023 591 aaPredicted RBP7.74□□□□□ -1.17
MUC1-227ENST00000615517 PDE1AP54750 535 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 USP41Q3LFD5 358 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 PABPC1LQ4VXU2 614 aaKnown RBP7.74□□□□□ -1.17
MUC1-227ENST00000615517 RTP2Q5QGT7 225 aa7.74□□□□□ -1.17
MUC1-227ENST00000615517 FUT10Q6P4F1 479 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms