RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PKNOX2Q96KN3 472 aa20.7■□□□□ 0.9
MMP28-204ENST00000615136 MFSD14AQ96MC6 490 aa20.7■□□□□ 0.9
MMP28-204ENST00000615136 FAM213AQ9BRX8 229 aa20.7■□□□□ 0.9
MMP28-204ENST00000615136 EHD2Q9NZN4 543 aa20.7■□□□□ 0.9
MMP28-204ENST00000615136 FAN1Q9Y2M0 1017 aa20.7■□□□□ 0.9
MMP28-204ENST00000615136 CYP24A1Q07973 514 aa20.69■□□□□ 0.9
MMP28-204ENST00000615136 GLYCTKQ8IVS8 523 aa20.69■□□□□ 0.9
MMP28-204ENST00000615136 GSPT2Q8IYD1 628 aaKnown RBP20.69■□□□□ 0.9
MMP28-204ENST00000615136 SLC30A5Q8TAD4 765 aa20.69■□□□□ 0.9
MMP28-204ENST00000615136 ZBTB45Q96K62 511 aaPredicted RBP20.69■□□□□ 0.9
MMP28-204ENST00000615136 SMARCAL1Q9NZC9 954 aa20.69■□□□□ 0.9
MMP28-204ENST00000615136 DMGDHQ9UI17 866 aaKnown RBP20.69■□□□□ 0.9
MMP28-204ENST00000615136 SIP14410 1827 aa20.69■□□□□ 0.9
MMP28-204ENST00000615136 GRID2IPA4D2P6 1211 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 P4HA2O15460 535 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 TNFRSF8P28908 595 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 COPB2P35606 906 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 GJC2Q5T442 439 aaPredicted RBP20.68■□□□□ 0.9
MMP28-204ENST00000615136 FAM160B1Q5W0V3 765 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 PALB2Q86YC2 1186 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
MMP28-204ENST00000615136 HDAC7Q8WUI4 952 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 BRI3BPQ8WY22 251 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 TTLL13PA6NNM8 815 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 ZBTB42B2RXF5 422 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 MKRN4PQ13434 485 aaPredicted RBP20.68■□□□□ 0.9
MMP28-204ENST00000615136 CAPSQ13938 189 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
MMP28-204ENST00000615136 GPD1LQ8N335 351 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 MORC4Q8TE76 937 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 GLG1Q92896 1179 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 ZBTB10Q96DT7 871 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 NRBP2Q9NSY0 501 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 RBM12Q9NTZ6 932 aaKnown RBP20.68■□□□□ 0.9
MMP28-204ENST00000615136 STIM2Q9P246 746 aa20.68■□□□□ 0.9
MMP28-204ENST00000615136 CCL15-CCL14A0A0B4J2E2 113 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 FTCDO95954 541 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 DLATP10515 647 aaKnown RBP20.67■□□□□ 0.9
MMP28-204ENST00000615136 GARTP22102 1010 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 NAMPTP43490 491 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 LIG4P49917 911 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 CCL15Q16663 113 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 TAS1R2Q8TE23 839 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 SPATA33Q96N06 139 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 GOLPH3Q9H4A6 298 aa20.67■□□□□ 0.9
MMP28-204ENST00000615136 CES2O00748 559 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 MAFO75444 373 aaPredicted RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 SYF2O95926 243 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 TXNP10599 105 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 ZBTB41Q5SVQ8 909 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 LMBRD2Q68DH5 695 aaPredicted RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 DHX37Q8IY37 1157 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 SHCBP1Q8NEM2 672 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 GPRC5AQ8NFJ5 357 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 DEPTORQ8TB45 409 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 SLC20A1Q8WUM9 679 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 TRAPPC12Q8WVT3 735 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 KREMEN1Q96MU8 473 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 TARS2Q9BW92 718 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 PACSIN2Q9UNF0 486 aaPredicted RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 TMCO5BA8MYB1 307 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 NOP56O00567 594 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 LGR5O75473 907 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 RFC5P40937 340 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 ACOT2P49753 483 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 KIF22Q14807 665 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 KRT39Q6A163 491 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 C8orf74Q6P047 294 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 PRPF31Q8WWY3 499 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 ZNF516Q92618 1163 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 MS4A14Q96JA4 679 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 MPHOSPH6Q99547 160 aaKnown RBP20.66■□□□□ 0.9
MMP28-204ENST00000615136 AZI2Q9H6S1 392 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 ACP6Q9NPH0 428 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 TAS2R14Q9NYV8 317 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 PNMA3Q9UL41 463 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 PLXNB2O15031 1838 aa20.66■□□□□ 0.9
MMP28-204ENST00000615136 PLXNA1Q9UIW2 1896 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 K7ERI5 159 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 PMM2O15305 246 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 CETN1Q12798 172 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 TAF3Q5VWG9 929 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 CRELD2Q6UXH1 353 aaPredicted RBP20.65■□□□□ 0.9
MMP28-204ENST00000615136 SV2AQ7L0J3 742 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 LRRC71Q8N4P6 559 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 TMC2Q8TDI7 906 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 TMEM8AQ9HCN3 771 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 A0A0U1RQG5 324 aaPredicted RBP20.65■□□□□ 0.9
MMP28-204ENST00000615136 CETPP11597 493 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 ADORA2AP29274 412 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 MATR3P43243 847 aaKnown RBP eCLIP20.65■□□□□ 0.9
MMP28-204ENST00000615136 STRN3Q13033 797 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 PLCB4Q15147 1175 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 IFI16Q16666 785 aaKnown RBP20.65■□□□□ 0.9
MMP28-204ENST00000615136 VPS36Q86VN1 386 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 COQ4Q9Y3A0 265 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 STYXL1Q9Y6J8 313 aa20.65■□□□□ 0.9
MMP28-204ENST00000615136 PTPRJQ12913 1337 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms