RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TRMT1LQ7Z2T5 733 aaKnown RBP15.87■□□□□ 0.13
CDH1-213ENST00000612417 ZNF526Q8TF50 670 aaPredicted RBP15.87■□□□□ 0.13
CDH1-213ENST00000612417 CDHR1Q96JP9 859 aa15.87■□□□□ 0.13
CDH1-213ENST00000612417 CARD9Q9H257 536 aa15.87■□□□□ 0.13
CDH1-213ENST00000612417 OSGEPQ9NPF4 335 aa15.87■□□□□ 0.13
CDH1-213ENST00000612417 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 ANKRD62A6NC57 917 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 H0YGN5 161 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 DDX3YO15523 660 aaKnown RBP15.86■□□□□ 0.13
CDH1-213ENST00000612417 SORBS3O60504 671 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 RGS20O76081 388 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 NR1D1P20393 614 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 SFNP31947 248 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 HSD17B3P37058 310 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 SP4Q02446 784 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 TCEAL1Q15170 157 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 PPP2R5EQ16537 467 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 KCTD16Q68DU8 428 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 PHLDB3Q6NSJ2 640 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 SYCP3Q8IZU3 236 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 TMEM206Q9H813 350 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 LARSQ9P2J5 1176 aaKnown RBP15.86■□□□□ 0.13
CDH1-213ENST00000612417 DBR1Q9UK59 544 aaKnown RBP15.86■□□□□ 0.13
CDH1-213ENST00000612417 PNMA3Q9UL41 463 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 NFS1Q9Y697 457 aa15.86■□□□□ 0.13
CDH1-213ENST00000612417 SRRM3A6NNA2 597 aaPredicted RBP15.85■□□□□ 0.13
CDH1-213ENST00000612417 EBAG9O00559 213 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 MAPK13O15264 365 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 CCNE2O96020 404 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 CYP2C8P10632 490 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 CETPP11597 493 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 ITGA4P13612 1032 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 CCT5P48643 541 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 ALDH5A1P51649 535 aaPredicted RBP15.85■□□□□ 0.13
CDH1-213ENST00000612417 FKBP1BP68106 108 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 MTMR3Q13615 1198 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 CLUL1Q15846 466 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 UAP1Q16222 522 aaPredicted RBP15.85■□□□□ 0.13
CDH1-213ENST00000612417 PTPROQ16827 1216 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 Q3C1V9 767 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 TMBIM4Q9HC24 238 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 K7ENM7 598 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 PMM2O15305 246 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 KRT13P13646 458 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 TNFAIP3P21580 790 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 GTF2A2P52657 109 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 MCCD1P59942 119 aaPredicted RBP15.85■□□□□ 0.13
CDH1-213ENST00000612417 FSTL1Q12841 308 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 PDCLQ13371 301 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 DCAF12L1Q5VU92 463 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 SEPT14Q6ZU15 432 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 RHOT2Q8IXI1 618 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 EFCAB13Q8IY85 973 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 NAP1L3Q99457 506 aaPredicted RBP15.85■□□□□ 0.13
CDH1-213ENST00000612417 NEUROG2Q9H2A3 272 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 ST6GALNAC4Q9H4F1 302 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 FAM114A2Q9NRY5 505 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 AMACRQ9UHK6 382 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 USP20Q9Y2K6 914 aa15.85■□□□□ 0.13
CDH1-213ENST00000612417 WDR81Q562E7 1941 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 ZNFX1Q9P2E3 1918 aaKnown RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 CCL15-CCL14A0A0B4J2E2 113 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 SPATA31C2B4DYI2 1134 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 LYPLA2O95372 231 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 KCNA2P16389 499 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 COPB2P35606 906 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 PTENP60484 403 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 PSMC5P62195 406 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 SNRPFP62306 86 aaKnown RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 CCL15Q16663 113 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 CEP85LQ5SZL2 805 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 ZNF746Q6NUN9 644 aaPredicted RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 ARHGEF26Q96DR7 871 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 NMRK2Q9NPI5 230 aa15.84■□□□□ 0.13
CDH1-213ENST00000612417 ATXN2Q99700 1313 aaKnown RBP15.84■□□□□ 0.13
CDH1-213ENST00000612417 SOWAHBA6NEL2 793 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 GOLGA6L10A6NI86 522 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 FOXN3O00409 490 aaPredicted RBP15.83■□□□□ 0.13
CDH1-213ENST00000612417 FGGP02679 453 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 PGK2P07205 417 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 CETN1Q12798 172 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 KCTD2Q14681 263 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 UGCGQ16739 394 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 EPC2Q52LR7 807 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 SPDYCQ5MJ68 293 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 DDX42Q86XP3 938 aaKnown RBP eCLIP15.83■□□□□ 0.13
CDH1-213ENST00000612417 MMP19Q99542 508 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 AGPAT1Q99943 283 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 THAP2Q9H0W7 228 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 SLC9A2Q9UBY0 812 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 UTP11Q9Y3A2 253 aaKnown RBP15.83■□□□□ 0.13
CDH1-213ENST00000612417 PCDHA10Q9Y5I2 948 aa15.83■□□□□ 0.13
CDH1-213ENST00000612417 PDHXO00330 501 aa15.83■□□□□ 0.12
CDH1-213ENST00000612417 TTI1O43156 1089 aa15.83■□□□□ 0.12
CDH1-213ENST00000612417 PLS3P13797 630 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms