RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 GABPB2Q8TAK5 448 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 ETNPPLQ8TBG4 499 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 MBOAT7Q96N66 472 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 GDF3Q9NR23 364 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 TSKSQ9UJT2 592 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 COL4A5P29400 1685 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 CYP3A7-CYP3A51PA0A087WV96 503 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 MYO1FO00160 1098 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 SART1O43290 800 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 CYP3A7P24462 503 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 USP11P51784 963 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 JAG1P78504 1218 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 KNOP1Q1ED39 458 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 LENG9Q96B70 501 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 CFBP00751 764 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 NR3C1P04150 777 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 SPATA31C1P0DKV0 1188 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 LSP1P33241 339 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 CTNNA1P35221 906 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 PAPOLAP51003 745 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 TNNC1P63316 161 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZNF572Q7Z3I7 529 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 IQCKQ8N0W5 287 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 DCAF4Q8WV16 495 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 CAVIN3Q969G5 261 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 CEP63Q96MT8 703 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 NYAP2Q9P242 653 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 CAPN7Q9Y6W3 813 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 IGSF9BQ9UPX0 1349 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 TISP43B9A030 160 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 RBAK-RBAKDNI3L0D1 243 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 TBCAO75347 108 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 HSD17B3P37058 310 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 ECE1P42892 770 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 PALB2Q86YC2 1186 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 KLF15Q9UIH9 416 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 F5H6K3 240 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 PPIP5K2O43314 1243 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 INPP5BP32019 993 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 KLRC3Q07444 240 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 NAP1L4Q99733 375 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 EDEM3Q9BZQ6 932 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 TAS2R14Q9NYV8 317 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 SCAF8Q9UPN6 1271 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-202ENST00000611950 CASP8AP2Q9UKL3 1982 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 ASTN1O14525 1302 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 DDX3XO00571 662 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 OPLAHO14841 1288 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 NDUFB10O96000 172 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 MARSP56192 900 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 ITIH3Q06033 890 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 RCN1Q15293 331 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 UAP1Q16222 522 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZNF746Q6NUN9 644 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 CCDC174Q6PII3 467 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZC3H3Q8IXZ2 948 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 IDI2Q9BXS1 227 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 GLT8D2Q9H1C3 349 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 MAP3K20Q9NYL2 800 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 GOLGA6L10A6NI86 522 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 STK25O00506 426 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 MSH4O15457 936 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 EVI5O60447 810 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 FGGP02679 453 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 GALCP54803 685 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 AP3B2Q13367 1082 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 AOC3Q16853 763 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 UBE2Q1Q7Z7E8 422 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 SYCP3Q8IZU3 236 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 SLC35C1Q96A29 364 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 PCIF1Q9H4Z3 704 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 TUBGCP4Q9UGJ1 667 aa11.49□□□□□ -0.57
PCDHGC3-202ENST00000611950 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 DYTNA2CJ06 578 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 AOC2O75106 756 aa11.48□□□□□ -0.57
PCDHGC3-202ENST00000611950 GNA14O95837 355 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms