RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 NOTUMQ6P988 496 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 MPZL3Q6UWV2 235 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 FAM114A1Q8IWE2 563 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 XXYLT1Q8NBI6 393 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 GDF15Q99988 308 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 PDZD7Q9H5P4 517 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 KIAA1586Q9HCI6 787 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 TMEM39AQ9NV64 488 aa17.44■□□□□ 0.38
CLTCL1-207ENST00000611723 GOLGA6L3A6NEY3 463 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 LRRC10BA6NIK2 292 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 KIAA0355O15063 1070 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 LDHAP00338 332 aaKnown RBP17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 MCF2P10911 925 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 POU5F1Q01860 360 aaKnown RBP17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 GPNMBQ14956 572 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 EEF1DP3Q658K8 133 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 FRMD5Q7Z6J6 570 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 BORCS6Q96GS4 357 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 CPB2Q96IY4 423 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 OSBPL7Q9BZF2 842 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 PCIF1Q9H4Z3 704 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 AGO2Q9UKV8 859 aaKnown RBP17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 PADI3Q9ULW8 664 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 COL6A3P12111 3177 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 DNAH12Q6ZR08 3092 aa17.43■□□□□ 0.38
CLTCL1-207ENST00000611723 EXTL3O43909 919 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 FAM189A1O60320 539 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 EXOC3O60645 756 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 AKAP3O75969 853 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 GHRP10912 638 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 SYN1P17600 705 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 EEF1GP26641 437 aaKnown RBP17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 CD52P31358 61 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 CASP4P49662 377 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 CYP2J2P51589 502 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 ENPEPQ07075 957 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 SPAG1Q07617 926 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 KYAT1Q16773 422 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 DCAF4L1Q3SXM0 396 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 APBB1IPQ7Z5R6 666 aaPredicted RBP17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 GPD1LQ8N335 351 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 DEFB123Q8N688 67 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 TCHPQ9BT92 498 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 MSTO1Q9BUK6 570 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 TRAIPQ9BWF2 469 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 CDT1Q9H211 546 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 METTL14Q9HCE5 456 aaKnown RBP17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 CUL9Q8IWT3 2517 aa17.42■□□□□ 0.38
CLTCL1-207ENST00000611723 OGTO15294 1046 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 NBNO60934 754 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 CXCL10P02778 98 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 PAK2Q13177 524 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 DSC3Q14574 896 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 TMEM132AQ24JP5 1023 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 ZNF568Q3ZCX4 644 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 TCP11X2Q5H9J9 407 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 UBXN11Q5T124 520 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 SLC27A1Q6PCB7 646 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 CRELD2Q6UXH1 353 aaPredicted RBP17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 EEF2KMTQ96G04 330 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 ADPGKQ9BRR6 497 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 WNT8AQ9H1J5 351 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 ANKFY1Q9P2R3 1169 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 MAGEC2Q9UBF1 373 aaPredicted RBP17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 LIMA1Q9UHB6 759 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 PIN4Q9Y237 131 aaKnown RBP17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 UMODL1Q5DID0 1318 aa17.41■□□□□ 0.38
CLTCL1-207ENST00000611723 TRIM43BA6NCK2 446 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 KCNJ18B7U540 433 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 TIMP1P01033 207 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 CDK11BP21127 795 aaKnown RBP17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 RFC2P35250 354 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 MATR3P43243 847 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 NFX1Q12986 1120 aaKnown RBP17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 KCNJ12Q14500 433 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 PLEKHG4Q58EX7 1191 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 ZBTB33Q86T24 672 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 FAM186BQ8IYM0 893 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 TRIM43Q96BQ3 446 aaPredicted RBP17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 CNOT6LQ96LI5 555 aaKnown RBP17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 MFSD14AQ96MC6 490 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 TMX1Q9H3N1 280 aa17.4■□□□□ 0.38
CLTCL1-207ENST00000611723 LAMA3Q16787 3333 aa17.39■□□□□ 0.38
CLTCL1-207ENST00000611723 ATP1A3P13637 1013 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 ZSCAN20P17040 1043 aaPredicted RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 CYP2C18P33260 490 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 SNRNP35Q16560 246 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 SARM1Q6SZW1 724 aa17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 APTXQ7Z2E3 356 aaKnown RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 CDR2LQ86X02 465 aaPredicted RBP17.39■□□□□ 0.37
CLTCL1-207ENST00000611723 TRIM59Q8IWR1 403 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms