RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 COQ4Q9Y3A0 265 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 ZNF233A6NK53 670 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 HEXIM1O94992 359 aaKnown RBP14.7□□□□□ -0.06
NEK3-205ENST00000610828 FTLP02792 175 aaPredicted RBP14.7□□□□□ -0.06
NEK3-205ENST00000610828 GLI1P08151 1106 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 EDNRBP24530 442 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 ABCD1P33897 745 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 SLC47A2Q86VL8 602 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 KLHL7Q8IXQ5 586 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 ASAP3Q8TDY4 903 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 FAM84AQ96KN4 292 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 PORCNQ9H237 461 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 KCNG1Q9UIX4 513 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 PAPPA2Q9BXP8 1791 aa14.7□□□□□ -0.06
NEK3-205ENST00000610828 GSTTP1A0A1W2PQM5 241 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 GLRA2P23416 452 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 GTF2H1P32780 548 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 TNNC1P63316 161 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 NEDD9Q14511 834 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 NOP9Q86U38 636 aaKnown RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 DEPTORQ8TB45 409 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 ACTRT1Q8TDG2 376 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 HELQQ8TDG4 1101 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 SHC3Q92529 594 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 HES6Q96HZ4 224 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 VPS18Q9P253 973 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 IGKV6D-21A0A0A0MT36 114 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 ZSCAN5CA6NGD5 496 aaPredicted RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 PGRMC1O00264 195 aaKnown RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 PHACTR2O75167 634 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 PGK2P07205 417 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 ZBTB48P10074 688 aaPredicted RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 NF2P35240 595 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 GUCY2DQ02846 1103 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 PDE4CQ08493 712 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 PRPF4BQ13523 1007 aaKnown RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 LY6KQ17RY6 165 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 LMBRD2Q68DH5 695 aaPredicted RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 SND1Q7KZF4 910 aaKnown RBP eCLIP14.69□□□□□ -0.06
NEK3-205ENST00000610828 IFT20Q8IY31 132 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 UPF1Q92900 1129 aaKnown RBP eCLIP14.69□□□□□ -0.06
NEK3-205ENST00000610828 PCYT2Q99447 389 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.69□□□□□ -0.063e-10■■■■□ 19.3
NEK3-205ENST00000610828 PI4K2AQ9BTU6 479 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 ISCUQ9H1K1 167 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 EPB41L5Q9HCM4 733 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 NOCTQ9UK39 431 aaKnown RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 COG5Q9UP83 839 aa14.69□□□□□ -0.06
NEK3-205ENST00000610828 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
NEK3-205ENST00000610828 ESYT3A0FGR9 886 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 K7ERI5 159 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 EXTL3O43909 919 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 GGPS1O95749 300 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 TCF7P36402 384 aaPredicted RBP14.68□□□□□ -0.06
NEK3-205ENST00000610828 NAMPTP43490 491 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 STAT5BP51692 787 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 EPHB4P54760 987 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 RHOT2Q8IXI1 618 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 TATDN2Q93075 761 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 FNBP1Q96RU3 617 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 AP1M1Q9BXS5 423 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 NIFKQ9BYG3 293 aaKnown RBP14.68□□□□□ -0.06
NEK3-205ENST00000610828 CTTNBP2NLQ9P2B4 639 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 AGO2Q9UKV8 859 aaKnown RBP14.68□□□□□ -0.06
NEK3-205ENST00000610828 CXCL11O14625 94 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 RTN2O75298 545 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 CNMDO75829 334 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 MMEP08473 750 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 CHRNB2P17787 502 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 TNNI1P19237 187 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 ARL2P36404 184 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 ACOT2P49753 483 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 PDE6CP51160 858 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
NEK3-205ENST00000610828 IFT81Q8WYA0 676 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 CDCA5Q96FF9 252 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 KIAA1586Q9HCI6 787 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 TXNRD2Q9NNW7 524 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 NRBP2Q9NSY0 501 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 ANKFY1Q9P2R3 1169 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 AGTPBP1Q9UPW5 1226 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 FAN1Q9Y2M0 1017 aa14.68□□□□□ -0.06
NEK3-205ENST00000610828 SPDYE5A6NIY4 337 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 RAD51CO43502 376 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 TGFB3P10600 412 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 CYP11B1P15538 503 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 TNFRSF8P28908 595 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 FAM193AP78312 1265 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 GPC5P78333 572 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 FAM160B1Q5W0V3 765 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 FAM71BQ8TC56 605 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
NEK3-205ENST00000610828 DHX38Q92620 1227 aaKnown RBP14.67□□□□□ -0.06
NEK3-205ENST00000610828 ZBTB45Q96K62 511 aaPredicted RBP14.67□□□□□ -0.06
NEK3-205ENST00000610828 CEP89Q96ST8 783 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms