RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PCYT2Q99447 389 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 HINFPQ9BQA5 517 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 A0A0U1RQG5 324 aaPredicted RBP30.27■■■□□ 2.44
CSPG5-205ENST00000610462 ZNF233A6NK53 670 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 CEP104O60308 925 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 BUB1BO60566 1050 aaPredicted RBP30.27■■■□□ 2.44
CSPG5-205ENST00000610462 SGPL1O95470 568 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 GLRA2P23416 452 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 NAMPTP43490 491 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 RNASE9P60153 205 aaKnown RBP30.27■■■□□ 2.44
CSPG5-205ENST00000610462 STRN3Q13033 797 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 SV2AQ7L0J3 742 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 TAS1R2Q8TE23 839 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP30.27■■■□□ 2.44
CSPG5-205ENST00000610462 HPCAL4Q9UM19 191 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 EXTL3O43909 919 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 TGFB3P10600 412 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 PTPROQ16827 1216 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 EPS8L1Q8TE68 723 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 SLC7A3Q8WY07 619 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 NOCTQ9UK39 431 aaKnown RBP30.27■■■□□ 2.44
CSPG5-205ENST00000610462 STYXL1Q9Y6J8 313 aa30.27■■■□□ 2.44
CSPG5-205ENST00000610462 SLC25A27O95847 323 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 NF2P35240 595 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 RFC5P40937 340 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 TNNC1P63316 161 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 CDCA5Q96FF9 252 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 NRBP2Q9NSY0 501 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 AGTPBP1Q9UPW5 1226 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 KCNH4Q9UQ05 1017 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 KIAA0391O15091 583 aaKnown RBP30.26■■■□□ 2.43
CSPG5-205ENST00000610462 DLATP10515 647 aaKnown RBP30.26■■■□□ 2.43
CSPG5-205ENST00000610462 HADHBP55084 474 aaKnown RBP30.26■■■□□ 2.43
CSPG5-205ENST00000610462 PRPF4BQ13523 1007 aaKnown RBP30.26■■■□□ 2.43
CSPG5-205ENST00000610462 FAM160B1Q5W0V3 765 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 NOP9Q86U38 636 aaKnown RBP30.26■■■□□ 2.43
CSPG5-205ENST00000610462 RHOT2Q8IXI1 618 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 KRT12Q99456 494 aa30.26■■■□□ 2.43
CSPG5-205ENST00000610462 CYP26A1O43174 497 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 PIGRP01833 764 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 FTLP02792 175 aaPredicted RBP30.25■■■□□ 2.43
CSPG5-205ENST00000610462 CHRNB2P17787 502 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 TCEAL1Q15170 157 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 TARBP2Q15633 366 aaKnown RBP30.25■■■□□ 2.43
CSPG5-205ENST00000610462 RASGEF1CQ8N431 466 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 DEPTORQ8TB45 409 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 AFAP1L1Q8TED9 768 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 SCFD2Q8WU76 684 aa30.25■■■□□ 2.43
CSPG5-205ENST00000610462 CALR3Q96L12 384 aaKnown RBP30.25■■■□□ 2.43
CSPG5-205ENST00000610462 RTN2O75298 545 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 AARSP49588 968 aaKnown RBP eCLIP30.24■■■□□ 2.43
CSPG5-205ENST00000610462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.24■■■□□ 2.43
CSPG5-205ENST00000610462 IFT20Q8IY31 132 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.24■■■□□ 2.43
CSPG5-205ENST00000610462 GDF3Q9NR23 364 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 PGRMC1O00264 195 aaKnown RBP30.24■■■□□ 2.43
CSPG5-205ENST00000610462 STAT5BP51692 787 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 PPIL2Q13356 520 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 MOB2Q70IA6 237 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 PSPC1Q8WXF1 523 aaKnown RBP30.24■■■□□ 2.43
CSPG5-205ENST00000610462 GDAP1L1Q96MZ0 367 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 MED4Q9NPJ6 270 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 UTRNP46939 3433 aa30.24■■■□□ 2.43
CSPG5-205ENST00000610462 LRRIQ4A6NIV6 560 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 GZMAP12544 262 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 EPHB4P54760 987 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 PSMD6Q15008 389 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 METTL7BQ6UX53 244 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 C15orf39Q6ZRI6 1047 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 SEPT1Q8WYJ6 367 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 CCDC102AQ96A19 550 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 PCDHB18PQ96TA0 734 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 MPHOSPH6Q99547 160 aaKnown RBP30.23■■■□□ 2.43
CSPG5-205ENST00000610462 COG5Q9UP83 839 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 ZNFX1Q9P2E3 1918 aaKnown RBP30.23■■■□□ 2.43
CSPG5-205ENST00000610462 K7ERI5 159 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 ZC3H11AO75152 810 aaKnown RBP eCLIP30.23■■■□□ 2.43
CSPG5-205ENST00000610462 HEXIM1O94992 359 aaKnown RBP30.23■■■□□ 2.43
CSPG5-205ENST00000610462 GGPS1O95749 300 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 GLI1P08151 1106 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 COPB2P35606 906 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 CLDN10P78369 228 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 HSP90B2PQ58FF3 399 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 SLC47A2Q86VL8 602 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 FAM71BQ8TC56 605 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 R3HDMLQ9H3Y0 253 aa30.23■■■□□ 2.43
CSPG5-205ENST00000610462 AGO2Q9UKV8 859 aaKnown RBP30.23■■■□□ 2.43
CSPG5-205ENST00000610462 ZC3H4Q9UPT8 1303 aaKnown RBP30.22■■■□□ 2.43
CSPG5-205ENST00000610462 GPC5P78333 572 aa30.22■■■□□ 2.43
CSPG5-205ENST00000610462 TTLL12Q14166 644 aaPredicted RBP30.22■■■□□ 2.43
CSPG5-205ENST00000610462 TAF3Q5VWG9 929 aa30.22■■■□□ 2.43
CSPG5-205ENST00000610462 C9orf131Q5VYM1 1079 aa30.22■■■□□ 2.43
CSPG5-205ENST00000610462 SLFN12LQ6IEE8 588 aa30.22■■■□□ 2.43
CSPG5-205ENST00000610462 NOC2LQ9Y3T9 749 aaKnown RBP30.22■■■□□ 2.43
CSPG5-205ENST00000610462 TCF7P36402 384 aaPredicted RBP30.21■■■□□ 2.43
CSPG5-205ENST00000610462 EMBQ6PCB8 327 aa30.21■■■□□ 2.43
CSPG5-205ENST00000610462 ENOSF1Q7L5Y1 443 aa30.21■■■□□ 2.43
CSPG5-205ENST00000610462 ZNF516Q92618 1163 aa30.21■■■□□ 2.43
CSPG5-205ENST00000610462 TATDN2Q93075 761 aa30.21■■■□□ 2.43
CSPG5-205ENST00000610462 TMEM134Q9H6X4 195 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms