RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 RRAGBQ5VZM2 374 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 MRPS27Q92552 414 aaKnown RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 ZBTB45Q96K62 511 aaPredicted RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 TARS2Q9BW92 718 aaKnown RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 GBP3Q9H0R5 595 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 NSUN3Q9H649 340 aaKnown RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 SNTG2Q9NY99 539 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 SPG21Q9NZD8 308 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 STK17AQ9UEE5 414 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 CCDC39Q9UFE4 941 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 ODF2LQ9ULJ1 636 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 TNFSF13BQ9Y275 285 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 GIT1Q9Y2X7 761 aa14.03□□□□□ -0.16
CD9-212ENST00000610354 RBM19Q9Y4C8 960 aaKnown RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 TCF20Q9UGU0 1960 aaKnown RBP14.03□□□□□ -0.16
CD9-212ENST00000610354 ZC3H11AO75152 810 aaKnown RBP eCLIP14.02□□□□□ -0.17
CD9-212ENST00000610354 PROZP22891 400 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 UBE3AQ05086 875 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
CD9-212ENST00000610354 E2F4Q16254 413 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 TIGD5Q53EQ6 642 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 ATL3Q6DD88 541 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 DYMQ7RTS9 669 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 COLGALT2Q8IYK4 626 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 PDILTQ8N807 584 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 CEP120Q8N960 986 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 RSPH1Q8WYR4 309 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 KCNN1Q92952 543 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 VN1R3Q9BXE9 311 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 TRIM6Q9C030 488 aaPredicted RBP14.02□□□□□ -0.17
CD9-212ENST00000610354 HAPLN2Q9GZV7 340 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 CDT1Q9H211 546 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 UBN1Q9NPG3 1134 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 THEGQ9P2T0 379 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 PARP2Q9UGN5 583 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 A0A0C4DFX4 3053 aa14.02□□□□□ -0.17
CD9-212ENST00000610354 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
CD9-212ENST00000610354 NMT1P30419 496 aaKnown RBP14.01□□□□□ -0.17
CD9-212ENST00000610354 DSC1Q08554 894 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 CSPP1Q1MSJ5 1256 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 TMEM132AQ24JP5 1023 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 HAUS6Q7Z4H7 955 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 MYCT1Q8N699 235 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 URGCPQ8TCY9 931 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
CD9-212ENST00000610354 TLR9Q9NR96 1032 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 LARSQ9P2J5 1176 aaKnown RBP14.01□□□□□ -0.17
CD9-212ENST00000610354 KANSL3Q9P2N6 904 aa14.01□□□□□ -0.17
CD9-212ENST00000610354 CITO14578 2027 aa14□□□□□ -0.17
CD9-212ENST00000610354 F8W810 466 aa14□□□□□ -0.17
CD9-212ENST00000610354 PTGESO14684 152 aa14□□□□□ -0.17
CD9-212ENST00000610354 NRP1O14786 923 aa14□□□□□ -0.17
CD9-212ENST00000610354 LINC01565O15544 149 aa14□□□□□ -0.17
CD9-212ENST00000610354 RECQL4O94761 1208 aa14□□□□□ -0.17
CD9-212ENST00000610354 FAM13AO94988 1023 aa14□□□□□ -0.17
CD9-212ENST00000610354 PPM1AP35813 382 aa14□□□□□ -0.17
CD9-212ENST00000610354 LTBRP36941 435 aa14□□□□□ -0.17
CD9-212ENST00000610354 TXLNAP40222 546 aa14□□□□□ -0.17
CD9-212ENST00000610354 STAT6P42226 847 aa14□□□□□ -0.17
CD9-212ENST00000610354 ALDH7A1P49419 539 aaKnown RBP14□□□□□ -0.17
CD9-212ENST00000610354 RNASELQ05823 741 aaKnown RBP14□□□□□ -0.17
CD9-212ENST00000610354 BECN1Q14457 450 aa14□□□□□ -0.17
CD9-212ENST00000610354 NAB2Q15742 525 aa14□□□□□ -0.17
CD9-212ENST00000610354 CTC1Q2NKJ3 1217 aa14□□□□□ -0.17
CD9-212ENST00000610354 DCAF4L1Q3SXM0 396 aa14□□□□□ -0.17
CD9-212ENST00000610354 CCDC73Q6ZRK6 1079 aa14□□□□□ -0.17
CD9-212ENST00000610354 SV2BQ7L1I2 683 aa14□□□□□ -0.17
CD9-212ENST00000610354 ZBTB33Q86T24 672 aa14□□□□□ -0.17
CD9-212ENST00000610354 KCNG4Q8TDN1 519 aa14□□□□□ -0.17
CD9-212ENST00000610354 DDX12PQ92771 950 aa14□□□□□ -0.17
CD9-212ENST00000610354 STAMQ92783 540 aa14□□□□□ -0.17
CD9-212ENST00000610354 HLA-CQ95604 372 aa14□□□□□ -0.17
CD9-212ENST00000610354 IGSF21Q96ID5 467 aa14□□□□□ -0.17
CD9-212ENST00000610354 TMEM175Q9BSA9 504 aa14□□□□□ -0.17
CD9-212ENST00000610354 UBE2ZQ9H832 354 aaPredicted RBP14□□□□□ -0.17
CD9-212ENST00000610354 PARVGQ9HBI0 331 aa14□□□□□ -0.17
CD9-212ENST00000610354 MARCH5Q9NX47 278 aa14□□□□□ -0.17
CD9-212ENST00000610354 CACNG4Q9UBN1 327 aa14□□□□□ -0.17
CD9-212ENST00000610354 GDAQ9Y2T3 454 aa14□□□□□ -0.17
CD9-212ENST00000610354 HIDE1A8MVS5 230 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 TRAK2O60296 914 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 EFEMP2O95967 443 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 KRT18P05783 430 aaKnown RBP13.99□□□□□ -0.17
CD9-212ENST00000610354 KCNQ1P51787 676 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 SMTNP53814 917 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
CD9-212ENST00000610354 ZC2HC1CQ53FD0 456 aaPredicted RBP13.99□□□□□ -0.17
CD9-212ENST00000610354 RESP18Q5W5W9 173 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 SLC39A4Q6P5W5 647 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 SFR1Q86XK3 245 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 LEO1Q8WVC0 666 aaPredicted RBP13.99□□□□□ -0.17
CD9-212ENST00000610354 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
CD9-212ENST00000610354 RABGGTAQ92696 567 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 ASB2Q96Q27 587 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 ADPGKQ9BRR6 497 aa13.99□□□□□ -0.17
CD9-212ENST00000610354 STRA6Q9BX79 667 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms