RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 GSTTP1A0A1W2PQM5 241 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 CCDC188H7C350 402 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 PGRMC1O00264 195 aaKnown RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 ATP4AP20648 1035 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 OSBPP22059 807 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 AARSP49588 968 aaKnown RBP eCLIP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 EPHB4P54760 987 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 MAP2K1Q02750 393 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 NNTQ13423 1086 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 PSMD6Q15008 389 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 TARBP2Q15633 366 aaKnown RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 PPP2R5EQ16537 467 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 NT5DC3Q86UY8 548 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 PPM1KQ8N3J5 372 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 RASGEF1CQ8N431 466 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 DEPTORQ8TB45 409 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 AENQ8WTP8 325 aaKnown RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 GTF3C2Q8WUA4 911 aaPredicted RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 MS4A14Q96JA4 679 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
USP6NL-206ENST00000609853 ELP3Q9H9T3 547 aa12.9□□□□□ -0.34
USP6NL-206ENST00000609853 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 K7ERI5 159 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 STAT5BP51692 787 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 GPC5P78333 572 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 C15orf39Q6ZRI6 1047 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 FAM71BQ8TC56 605 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 HELQQ8TDG4 1101 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 SCFD2Q8WU76 684 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 PSPC1Q8WXF1 523 aaKnown RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 CEP89Q96ST8 783 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 NAP1L3Q99457 506 aaPredicted RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 MROH8Q9H579 483 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 AZI2Q9H6S1 392 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 PDE11AQ9HCR9 933 aa12.89□□□□□ -0.35
USP6NL-206ENST00000609853 SEPT11Q9NVA2 429 aaKnown RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 DMGDHQ9UI17 866 aaKnown RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 NOCTQ9UK39 431 aaKnown RBP12.89□□□□□ -0.35
USP6NL-206ENST00000609853 TMCO5BA8MYB1 307 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 MIF4GDA9UHW6 222 aaKnown RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 MAFO75444 373 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 CNMDO75829 334 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 MTA2O94776 668 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 GLRA2P23416 452 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 TNNT3P45378 269 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 EFNA5P52803 228 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 SOX10P56693 466 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 C11orf63Q6NUN7 778 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 KREMEN1Q96MU8 473 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 CARD9Q9H257 536 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 PACSIN2Q9UNF0 486 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 CEP104O60308 925 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 BUB1BO60566 1050 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 SLC26A2P50443 739 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 PDE6CP51160 858 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 AP3M2P53677 418 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 BPIFB4P59827 614 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 CDR2Q01850 454 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 FSTL1Q12841 308 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 PAK2Q13177 524 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 KCTD2Q14681 263 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 IER5Q5VY09 327 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 PLPPR4Q7Z2D5 763 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 ZNF677Q86XU0 584 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 TCP11Q8WWU5 503 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-206ENST00000609853 CAVIN3Q969G5 261 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 RPS6KC1Q96S38 1066 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 SUGCTQ9HAC7 445 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 TELO2Q9Y4R8 837 aa12.88□□□□□ -0.35
USP6NL-206ENST00000609853 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
USP6NL-206ENST00000609853 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms