RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.2
USP6NL-205ENST00000609104 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
USP6NL-205ENST00000609104 WDR47O94967 919 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
USP6NL-205ENST00000609104 MCAMP43121 646 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 TRIM54Q9BYV2 358 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 SLC7A5P2Q9GIP4 190 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 MORC2Q9Y6X9 1032 aaPredicted RBP13.83□□□□□ -0.2
USP6NL-205ENST00000609104 NMT2O60551 498 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 TTC23LQ6PF05 361 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 PCDHGB4Q9UN71 923 aa13.83□□□□□ -0.2
USP6NL-205ENST00000609104 KCNA2P16389 499 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 SDC4P31431 198 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 DEPDC1Q5TB30 811 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 CLEC4FQ8N1N0 589 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 DCAF4Q8WV16 495 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 CYP2D6P10635 497 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 GNAT1P11488 350 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 EIF3EP60228 445 aaKnown RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 CCDC144BQ3MJ40 725 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 STXBP2Q15833 593 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 MCPH1Q8NEM0 835 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 TTC26A0AVF1 554 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 STXBP3O00186 592 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 SASH1O94885 1247 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 LRRC74AQ0VAA2 488 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 FMR1NBQ8N0W7 255 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ARIH2O95376 493 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 CDH6P55285 790 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 BCAR1P56945 870 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 MAPRE2Q15555 327 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 PEG3Q9GZU2 1588 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L18D6R9N7 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L22D6RA61 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L17D6RBQ6 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L19D6RCP7 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L20D6RJB6 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L24Q0WX57 530 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 OXER1Q8TDS5 423 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 TLR2O60603 784 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 GFAPP14136 432 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ADORA2BP29275 332 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ZBED2Q9BTP6 218 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 TMEM179Q6ZVK1 233 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 ACAP3Q96P50 834 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 EPN3Q9H201 632 aa13.82□□□□□ -0.2
USP6NL-205ENST00000609104 PHKA2P46019 1235 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 RINLQ6ZS11 566 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 INTS2Q9H0H0 1204 aaKnown RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ANO9A1A5B4 782 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ZBTB5O15062 677 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 NNMTP40261 264 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 MED21Q13503 144 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SPATA4Q8NEY3 305 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SPON2Q9BUD6 331 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SOX11P35716 441 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 GRIN1Q05586 938 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 AP3B2Q13367 1082 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SWSAP1Q6NVH7 229 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 AKAP10O43572 662 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 CACNB3P54284 484 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 URGCPQ8TCY9 931 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 LRRC1Q9BTT6 524 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 TBC1D4O60343 1298 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 MYBL1P10243 752 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 DHX34Q14147 1143 aaKnown RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 EFHC2Q5JST6 749 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 PID1Q7Z2X4 250 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 STAMBPL1Q96FJ0 436 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ANGPT2O15123 496 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 IREB2P48200 963 aaKnown RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 SLC10A4Q96EP9 437 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 STRBPQ96SI9 672 aaKnown RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 ZNF302Q9NR11 478 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
USP6NL-205ENST00000609104 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-205ENST00000609104 APRTP07741 180 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms