RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 UBE3AQ05086 875 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 STK38Q15208 465 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 PCBP1Q15365 356 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDDC2-204ENST00000608295 ZNF568Q3ZCX4 644 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 GLRA4Q5JXX5 417 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 NT5DC1Q5TFE4 455 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 TAS1R3Q7RTX0 852 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 HACE1Q8IYU2 909 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 SYT2Q8N9I0 419 aaPredicted RBP15.95■□□□□ 0.14
HDDC2-204ENST00000608295 CNNM3Q8NE01 707 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.95■□□□□ 0.14
HDDC2-204ENST00000608295 HASPINQ8TF76 798 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 REEP2Q9BRK0 252 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 ADPGKQ9BRR6 497 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 BLOC1S4Q9NUP1 217 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 ANKFY1Q9P2R3 1169 aa15.95■□□□□ 0.14
HDDC2-204ENST00000608295 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.94■□□□□ 0.14
HDDC2-204ENST00000608295 ACKR2O00590 384 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 C2CD2LO14523 706 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 NRP1O14786 923 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 FSCN2O14926 492 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 LTBRP36941 435 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 PLCB3Q01970 1234 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 FAM187BQ17R55 369 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 VPS52Q8N1B4 723 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 VN1R2Q8NFZ6 395 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 RAD54LQ92698 747 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 IGSF21Q96ID5 467 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 TARS2Q9BW92 718 aaKnown RBP15.94■□□□□ 0.14
HDDC2-204ENST00000608295 VN1R3Q9BXE9 311 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
HDDC2-204ENST00000608295 CASTOR2A6NHX0 329 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 K7ENM7 598 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 FAM13AO94988 1023 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 GUCY2CP25092 1073 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 EFNA5P52803 228 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 DUSP6Q16828 381 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 LEXMQ3ZCV2 418 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 SEZ6Q53EL9 994 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 ARSHQ5FYA8 562 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 DYMQ7RTS9 669 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 PDILTQ8N807 584 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 LARP4BQ92615 738 aaKnown RBP15.93■□□□□ 0.14
HDDC2-204ENST00000608295 CHAMP1Q96JM3 812 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 B3GALT6Q96L58 329 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 ZSCAN16Q9H4T2 348 aaPredicted RBP15.93■□□□□ 0.14
HDDC2-204ENST00000608295 ARHGAP28Q9P2N2 729 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 FAN1Q9Y2M0 1017 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 GIT1Q9Y2X7 761 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 TTC28Q96AY4 2481 aa15.93■□□□□ 0.14
HDDC2-204ENST00000608295 CITO14578 2027 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
HDDC2-204ENST00000608295 F13A1P00488 732 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 ZSCAN22P10073 491 aaPredicted RBP15.92■□□□□ 0.14
HDDC2-204ENST00000608295 MYBP10242 640 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 PLS3P13797 630 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 TXLNAP40222 546 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.141e-7■■■■□ 19.4
HDDC2-204ENST00000608295 ADAM15Q13444 863 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 SMC1AQ14683 1233 aaKnown RBP15.92■□□□□ 0.14
HDDC2-204ENST00000608295 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 COLGALT2Q8IYK4 626 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 EFHBQ8N7U6 833 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 BICD1Q96G01 975 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 PAAF1Q9BRP4 392 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 MRPL4Q9BYD3 311 aaKnown RBP15.92■□□□□ 0.14
HDDC2-204ENST00000608295 ZBP1Q9H171 429 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 CDT1Q9H211 546 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 UBN1Q9NPG3 1134 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 MARCH5Q9NX47 278 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 LZTS1Q9Y250 596 aa15.92■□□□□ 0.14
HDDC2-204ENST00000608295 SRPRBQ9Y5M8 271 aaKnown RBP15.92■□□□□ 0.14
HDDC2-204ENST00000608295 PLXNA3P51805 1871 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 A0A087X0B3 334 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 GRIK3Q13003 919 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 STRN3Q13033 797 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 CTC1Q2NKJ3 1217 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 DCAF4L1Q3SXM0 396 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 MYCT1Q8N699 235 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 KRI1Q8N9T8 703 aaKnown RBP15.91■□□□□ 0.14
HDDC2-204ENST00000608295 TMEM87AQ8NBN3 555 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 GSTCDQ8NEC7 633 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 ZBTB45Q96K62 511 aaPredicted RBP15.91■□□□□ 0.14
HDDC2-204ENST00000608295 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
HDDC2-204ENST00000608295 CCSER1Q9C0I3 900 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 KANSL3Q9P2N6 904 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 CCDC39Q9UFE4 941 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 CD207Q9UJ71 328 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 CDH22Q9UJ99 828 aa15.91■□□□□ 0.14
HDDC2-204ENST00000608295 GRXCR2A6NFK2 248 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 C2orf71A6NGG8 1288 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 PTGESO14684 152 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 SPTLC2O15270 562 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 CXCL14O95715 111 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 SP100P23497 879 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-204ENST00000608295 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
HDDC2-204ENST00000608295 STAT6P42226 847 aa15.9■□□□□ 0.14
HDDC2-204ENST00000608295 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms