RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 CYFIP2Q96F07 1278 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 GRHL1Q9NZI5 618 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 PFASO15067 1338 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 SYNGAP1Q96PV0 1343 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 TRAPPC3O43617 180 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 PHF2O75151 1096 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 KIAA0754O94854 1291 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 RPL21P46778 160 aaKnown RBP13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 PMS2P54278 862 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 RPS6P62753 249 aaKnown RBP13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 FMO1Q01740 532 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 IFT88Q13099 833 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 TCEAL1Q15170 157 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 CCDC137Q6PK04 289 aaKnown RBP13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 NIPA1Q7RTP0 329 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 RPS6KC1Q96S38 1066 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 PAGR1Q9BTK6 254 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 TOPORSQ9NS56 1045 aaPredicted RBP13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 ZNRF3Q9ULT6 936 aa13.97□□□□□ -0.17
SRGAP2-209ENST00000604247 LYPLA2O95372 231 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CCNE2O96020 404 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CALCAP01258 141 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CTNNA2P26232 953 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CNGA1P29973 690 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 NCKAP1LP55160 1127 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 SOX10P56693 466 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 MCF2L2Q86YR7 1114 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 DHX38Q92620 1227 aaKnown RBP13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CD101Q93033 1021 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 NUP85Q9BW27 656 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 ST6GALNAC4Q9H4F1 302 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
SRGAP2-209ENST00000604247 TLDC2A0PJX2 215 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 GZMAP12544 262 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 CYP11B1P15538 503 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 CHRNA3P32297 505 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 KCNJ1P48048 391 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 DRG2P55039 364 aaKnown RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 SLC29A2Q14542 456 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 PGM5Q15124 567 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 RNF187Q5TA31 235 aaPredicted RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 NSMFQ6X4W1 530 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 SPATS2Q86XZ4 545 aaKnown RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 C4orf19Q8IY42 314 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 UHMK1Q8TAS1 419 aaKnown RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 PARD3BQ8TEW8 1205 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 SHC3Q92529 594 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 VTI1AQ96AJ9 217 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 FAM84AQ96KN4 292 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 SEMA4AQ9H3S1 761 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 TBC1D22BQ9NU19 505 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 PNMA2Q9UL42 364 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 TBX20Q9UMR3 447 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 PTPN22Q9Y2R2 807 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 PCDHA3Q9Y5H8 950 aa13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.18
SRGAP2-209ENST00000604247 SMIM23A6NLE4 172 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 SRRM3A6NNA2 597 aaPredicted RBP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 MFAP3P55082 362 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 MICALCLQ6ZW33 695 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 TMEM161BQ8NDZ6 487 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 ZNF564Q8TBZ8 553 aaPredicted RBP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 HELQQ8TDG4 1101 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 TAS1R2Q8TE23 839 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 TLCD1Q96CP7 247 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 WNT8AQ9H1J5 351 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 DDX20Q9UHI6 824 aaKnown RBP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 RASAL2Q9UJF2 1139 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 MAPK13O15264 365 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 SPOPO43791 374 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 RARAP10276 462 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 NPTX2P47972 431 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 EIF3BP55884 814 aaKnown RBP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 PSMC5P62195 406 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 CLUL1Q15846 466 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 KRT39Q6A163 491 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 C6orf89Q6UWU4 347 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 ANO5Q75V66 913 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 MTMR14Q8NCE2 650 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 TATDN2Q93075 761 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 ZNF653Q96CK0 615 aa13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRGAP2-209ENST00000604247 DENND3A2RUS2 1198 aa13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 MTA2O94776 668 aa13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 FNTAP49354 379 aa13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
SRGAP2-209ENST00000604247 BSNDQ8WZ55 320 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms