RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ISCA1Q9BUE6 129 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 L2HGDHQ9H9P8 463 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 XAB2Q9HCS7 855 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 OLA1Q9NTK5 396 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 HPF1Q9NWY4 346 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 STIM2Q9P246 746 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 HOOK1Q9UJC3 728 aaKnown RBP5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 STRIP2Q9ULQ0 834 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 DUSP12Q9UNI6 340 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 PCDHGB2Q9Y5G2 931 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 GMEB1Q9Y692 573 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC30A1Q9Y6M5 507 aa5.43□□□□□ -1.54
SPTBN1-206ENST00000602898 CYP2D7A0A087X1C5 515 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 FIGNL2A6NMB9 653 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 H0Y626 953 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 NDC80O14777 642 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CAPN9O14815 690 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 STX6O43752 255 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CAVIN2O95810 425 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TIMP2P16035 220 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CASTP20810 708 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 LIG3P49916 1009 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 SCNN1BP51168 640 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 INHBCP55103 352 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CUL3Q13618 768 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 BTG3Q14201 252 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 RCN1Q15293 331 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TAF12Q16514 161 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 RPS26P11Q5JNZ5 115 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 THEMIS2Q5TEJ8 643 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 SPATA2LQ8IUW3 424 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 OR2C3Q8N628 320 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TMCO5AQ8N6Q1 288 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 RIPOR3Q96MK2 946 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CDK15Q96Q40 435 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 LRRCC1Q9C099 1032 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 VCPKMTQ9H867 229 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CFDP1Q9UEE9 299 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TUBGCP4Q9UGJ1 667 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CORO1CQ9ULV4 474 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 MAP4K5Q9Y4K4 846 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ST20-MTHFSA0A0A6YYL1 179 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 FZD9O00144 591 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 DDX3XO00571 662 aaKnown RBP eCLIP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 DDX3YO15523 660 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB14O43829 449 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 USP2O75604 605 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 FSBPO95073 299 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 STARD3NLO95772 234 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 LTFP02788 710 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 KCNJ6P48051 423 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 PMS1P54277 932 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TNIP1Q15025 636 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC85BQ15834 202 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 GNPTABQ3T906 1256 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 PKDCCQ504Y2 493 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 MIS18BP1Q6P0N0 1132 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ZNF804AQ7Z570 1209 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 APLFQ8IW19 511 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ZBTB38Q8NAP3 1195 aaPredicted RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 PCYOX1LQ8NBM8 494 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 EDEM1Q92611 657 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 KRT35Q92764 455 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 MXD3Q9BW11 206 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 TRIT1Q9H3H1 467 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 NRDE2Q9H7Z3 1164 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CERS4Q9HA82 394 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ADD3Q9UEY8 706 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CROTQ9UKG9 612 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 CORO2BQ9UQ03 480 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 SSX2IPQ9Y2D8 614 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 USP20Q9Y2K6 914 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 RRP7AQ9Y3A4 280 aaKnown RBP5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ANKRD30AQ9BXX3 1397 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 ITIH6Q6UXX5 1313 aa5.42□□□□□ -1.54
SPTBN1-206ENST00000602898 FAM187AA6NFU0 413 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PGPEP1LA6NFU8 196 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CYP27B1O15528 508 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SMPD2O60906 423 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RPSAP08865 295 aaKnown RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CYP2A6P11509 494 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 STMN1P16949 149 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RHOQP17081 205 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 ADH7P40394 386 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CTSOP43234 321 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 RPIAP49247 311 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MAPK10P53779 464 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GALNT1Q10472 559 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 MBTPS1Q14703 1052 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 TPD52L1Q16890 204 aaPredicted RBP5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 B3GNT9Q6UX72 402 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 PRICKLE2Q7Z3G6 844 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 LIX1LQ8IVB5 337 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CCDC144CPQ8IYA2 1237 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 SYTL1Q8IYJ3 562 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 CYP4X1Q8N118 509 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 GALNT15Q8N3T1 639 aa5.41□□□□□ -1.54
SPTBN1-206ENST00000602898 OR6C4Q8NGE1 309 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms