RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 BNIP3LO60238 219 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 LZTS3O60299 673 aaPredicted RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 ADARP55265 1226 aaKnown RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 ARL4CP56559 192 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 CUL4AQ13619 759 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 PDXDC1Q6P996 788 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 RNF139Q8WU17 664 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 EME1Q96AY2 570 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 NOL6Q9H6R4 1146 aaKnown RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 IPPQ9Y573 584 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 CEP152O94986 1710 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 FAM107AO95990 144 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 GJA8P48165 433 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TTC30BQ8N4P2 665 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TTC25Q96NG3 672 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 PLEKHF1Q96S99 279 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 MYH8P13535 1937 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 CITO14578 2027 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 ATP7BP35670 1465 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TJP3O95049 919 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 FRA10AC1Q70Z53 315 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 KLHL23Q8NBE8 558 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 HEMGNQ9BXL5 484 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 PRPF3O43395 683 aaKnown RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 BMP3P12645 472 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 NGRNQ9NPE2 291 aaKnown RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM33Q9UPN9 1127 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 ERVK-7P63135 1459 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 WDR17Q8IZU2 1322 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 TEX33O43247 280 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 CCNE1P24864 410 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 NOA1Q8NC60 698 aaKnown RBP9.2□□□□□ -0.94
CSMD1-216ENST00000602557 OSBP2Q969R2 916 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 AP5M1Q9H0R1 490 aa9.2□□□□□ -0.94
CSMD1-216ENST00000602557 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ATP6V1G2O95670 118 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 NR3C1P04150 777 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 DMC1Q14565 340 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 KPNB1Q14974 876 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ALKBH5Q6P6C2 394 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 KRT27Q7Z3Y8 459 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM8Q9BZR9 551 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 FAM49AQ9H0Q0 323 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 CAAP1Q9H8G2 361 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 RPF1Q9H9Y2 349 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ADD3Q9UEY8 706 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 CHD1O14646 1710 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TRIM49BA6NDI0 452 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 LGALS16A8MUM7 142 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 hCG_1984214I3L0E3 225 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 STRNO43815 780 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF713Q8N859 430 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 MIEF2Q96C03 454 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 RP1L1Q8IWN7 2480 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 POTEMA6NI47 508 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 PRR29P0C7W0 189 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF786Q8N393 782 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 CAPSLQ8WWF8 208 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 CCDC17Q96LX7 622 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZSWIM5Q9P217 1185 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 V9GYQ6 96 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TET3O43151 1660 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 KRT37O76014 449 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TUBGCP3Q96CW5 907 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TMA16Q96EY4 203 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZNF341Q9BYN7 854 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 BTBD7Q9P203 1132 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 HNRNPRO43390 633 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ASNA1O43681 348 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TAC1P20366 129 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 IL10P22301 178 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ST13P5Q8NFI4 369 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZBTB18Q99592 522 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ATP9AO75110 1047 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 RAD17O75943 681 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 RFC5P40937 340 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 CCNA1P78396 465 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 MIGA2Q7L4E1 593 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 OR9Q1Q8NGQ5 310 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 FSD1LQ9BXM9 530 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZDHHC9Q9Y397 364 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 PLEKHG2Q9H7P9 1386 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 POTEB3A0JP26 581 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 LONRF1Q17RB8 773 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 POTEBQ6S5H4 581 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 PPP4R3CPQ6ZMV5 832 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ZIM3Q96PE6 472 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 HEY1Q9Y5J3 304 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 TCN1P20061 433 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 LUZP2Q86TE4 346 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 DHX38Q92620 1227 aaKnown RBP9.19□□□□□ -0.94
CSMD1-216ENST00000602557 C2CD2Q9Y426 696 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 ITSN1Q15811 1721 aa9.19□□□□□ -0.94
CSMD1-216ENST00000602557 A0A1B0GW55 424 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms