RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 CBWD2Q8IUF1 395 aa25.05■■□□□ 1.6
IRF3-227ENST00000600911 PLEKHO2Q8TD55 490 aa25.05■■□□□ 1.6
IRF3-227ENST00000600911 TMEM132AQ24JP5 1023 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 NOC3LQ8WTT2 800 aaKnown RBP25.04■■□□□ 1.6
IRF3-227ENST00000600911 TMEM174Q8WUU8 243 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 BORCS6Q96GS4 357 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 CNOT6LQ96LI5 555 aaKnown RBP25.04■■□□□ 1.6
IRF3-227ENST00000600911 THAP9Q9H5L6 903 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 AGO2Q9UKV8 859 aaKnown RBP25.04■■□□□ 1.6
IRF3-227ENST00000600911 CCDC85CA6NKD9 419 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 CLDN3O15551 220 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 MATR3P43243 847 aaKnown RBP eCLIP25.04■■□□□ 1.6
IRF3-227ENST00000600911 ACOT2P49753 483 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 CCDC155Q8N6L0 562 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 GOLGA5Q8TBA6 731 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 LINC01599Q8WXQ3 324 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 FAM84AQ96KN4 292 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 MSTO1Q9BUK6 570 aa25.04■■□□□ 1.6
IRF3-227ENST00000600911 PRDM5Q9NQX1 630 aaPredicted RBP25.04■■□□□ 1.6
IRF3-227ENST00000600911 CETN3O15182 167 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 EXOC3O60645 756 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 NPTXRO95502 500 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 SNRPFP62306 86 aaKnown RBP25.03■■□□□ 1.6
IRF3-227ENST00000600911 PAK2Q13177 524 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 NOLC1Q14978 699 aaKnown RBP eCLIP25.03■■□□□ 1.6
IRF3-227ENST00000600911 FILIP1Q7Z7B0 1213 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 XXYLT1Q8NBI6 393 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 FBXL18Q96ME1 805 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 CEP63Q96MT8 703 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 FAM213AQ9BRX8 229 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 TCHPQ9BT92 498 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 CXCL16Q9H2A7 254 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 CGNQ9P2M7 1197 aaKnown RBP25.03■■□□□ 1.6
IRF3-227ENST00000600911 HES2Q9Y543 173 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 LTBP2Q14767 1821 aa25.03■■□□□ 1.6
IRF3-227ENST00000600911 CITO14578 2027 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 KCNJ18B7U540 433 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 GOLGA6L19H0YKK7 550 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 OSTNP61366 133 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 KCNJ12Q14500 433 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 DSC3Q14574 896 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 RTN4RL1Q86UN2 441 aaPredicted RBP25.02■■□□□ 1.6
IRF3-227ENST00000600911 THNSL1Q8IYQ7 743 aa25.02■■□□□ 1.6
IRF3-227ENST00000600911 GOLGA6L3A6NEY3 463 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 TCP11X2Q5H9J9 407 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 CREBRFQ8IUR6 639 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 GPD1LQ8N335 351 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 N4BP3O15049 544 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 KIAA0355O15063 1070 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 MYBPC2Q14324 1141 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 KRT31Q15323 416 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 PCBP1Q15365 356 aaKnown RBP eCLIP25.01■■□□□ 1.59
IRF3-227ENST00000600911 SLFN12LQ6IEE8 588 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 NOTUMQ6P988 496 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 IFIH1Q9BYX4 1025 aaKnown RBP25.01■■□□□ 1.59
IRF3-227ENST00000600911 GRPEL1Q9HAV7 217 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 TAB2Q9NYJ8 693 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 SQORQ9Y6N5 450 aa25.01■■□□□ 1.59
IRF3-227ENST00000600911 GPR182O15218 404 aa25■■□□□ 1.59
IRF3-227ENST00000600911 RPL13P26373 211 aaKnown RBP25■■□□□ 1.59
IRF3-227ENST00000600911 AXLP30530 894 aa25■■□□□ 1.59
IRF3-227ENST00000600911 DLG4P78352 724 aa25■■□□□ 1.59
IRF3-227ENST00000600911 SNRNP35Q16560 246 aaKnown RBP25■■□□□ 1.59
IRF3-227ENST00000600911 PTPN21Q16825 1174 aa25■■□□□ 1.59
IRF3-227ENST00000600911 SLC27A1Q6PCB7 646 aa25■■□□□ 1.59
IRF3-227ENST00000600911 FAM186BQ8IYM0 893 aa25■■□□□ 1.59
IRF3-227ENST00000600911 TMEM130Q8N3G9 435 aa25■■□□□ 1.59
IRF3-227ENST00000600911 SMG8Q8ND04 991 aaKnown RBP25■■□□□ 1.59
IRF3-227ENST00000600911 DBF4BQ8NFT6 615 aa25■■□□□ 1.59
IRF3-227ENST00000600911 RNF39Q9H2S5 420 aa25■■□□□ 1.59
IRF3-227ENST00000600911 NXF3Q9H4D5 531 aaKnown RBP25■■□□□ 1.59
IRF3-227ENST00000600911 MICAL3Q7RTP6 2002 aa25■■□□□ 1.59
IRF3-227ENST00000600911 RALGAPA2Q2PPJ7 1873 aa25■■□□□ 1.59
IRF3-227ENST00000600911 MEIS3P2A8K0S8 358 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 OGTO15294 1046 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 EXTL3O43909 919 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 MCF2P10911 925 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 PLEKHG4Q58EX7 1191 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 C1orf220Q5T0J3 134 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 DEFB128Q7Z7B8 93 aa24.99■■□□□ 1.59
IRF3-227ENST00000600911 CPSF3Q9UKF6 684 aaKnown RBP24.99■■□□□ 1.59
IRF3-227ENST00000600911 PDCD11Q14690 1871 aaKnown RBP24.99■■□□□ 1.59
IRF3-227ENST00000600911 SLC16A3O15427 465 aaKnown RBP24.98■■□□□ 1.59
IRF3-227ENST00000600911 CXCL10P02778 98 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 PSMC2P35998 433 aaKnown RBP24.98■■□□□ 1.59
IRF3-227ENST00000600911 MARSP56192 900 aaKnown RBP24.98■■□□□ 1.59
IRF3-227ENST00000600911 CCDC40Q4G0X9 1142 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 TRIM59Q8IWR1 403 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 C7orf61Q8IZ16 206 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 TNS4Q8IZW8 715 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 USP38Q8NB14 1042 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 NAP1L5Q96NT1 182 aaPredicted RBP24.98■■□□□ 1.59
IRF3-227ENST00000600911 RNF19AQ9NV58 838 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 INTS13Q9NVM9 706 aa24.98■■□□□ 1.59
IRF3-227ENST00000600911 LIMA1Q9UHB6 759 aaKnown RBP24.98■■□□□ 1.59
IRF3-227ENST00000600911 TIMP1P01033 207 aa24.97■■□□□ 1.59
IRF3-227ENST00000600911 TRIM49P0CI25 452 aa24.97■■□□□ 1.59
IRF3-227ENST00000600911 TRIM49CP0CI26 452 aa24.97■■□□□ 1.59
IRF3-227ENST00000600911 STAG3L1P0CL83 205 aa24.97■■□□□ 1.59
IRF3-227ENST00000600911 FANCCQ00597 558 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms