RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DCAF4L1Q3SXM0 396 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 ZCWPW2Q504Y3 356 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 SEZ6Q53EL9 994 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 ZBTB41Q5SVQ8 909 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 KLHL10Q6JEL2 608 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 TMCO2Q7Z6W1 182 aaPredicted RBP21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 ZSWIM2Q8NEG5 633 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 LPPQ93052 612 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 RNF39Q9H2S5 420 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 PCIF1Q9H4Z3 704 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 TTC3P53804 2025 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 SYCE3A1L190 88 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 TRIM49BA6NDI0 452 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 FAM189A1O60320 539 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 ZNF623O75123 536 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 RAB27AP51159 221 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 SLFN12LQ6IEE8 588 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 CENPPQ6IPU0 288 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 ARMCX5Q6P1M9 558 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 SASS6Q6UVJ0 657 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 MRPL10Q7Z7H8 261 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 TMEM192Q8IY95 271 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 THNSL1Q8IYQ7 743 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 CRIPAKQ8N1N5 446 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 POMGNT1Q8WZA1 660 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 P2RX5Q93086 422 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 MSTO1Q9BUK6 570 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 APOL6Q9BWW8 343 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 TRIM6Q9C030 488 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 RNF19AQ9NV58 838 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 CTNND2Q9UQB3 1225 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 TRAF3IP3Q9Y228 551 aa21.87■■□□□ 1.09
SHKBP1-222ENST00000600320 PDXKO00764 312 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 AMHP03971 560 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 GARTP22102 1010 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 CCNE1P24864 410 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 BMP8BP34820 402 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 KCNJ6P48051 423 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 ZSCAN23Q3MJ62 389 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 HS2ST1Q7LGA3 356 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 MLKLQ8NB16 471 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 RNF169Q8NCN4 708 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 NELFBQ8WX92 580 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 SAAL1Q96ER3 474 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 DHTKD1Q96HY7 919 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 MED15Q96RN5 788 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 FUCA2Q9BTY2 467 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 PRO3102Q9H379 93 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 SNTG2Q9NY99 539 aa21.86■■□□□ 1.09
SHKBP1-222ENST00000600320 GOLGA8IPA6NC78 632 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 GOLGA8JA6NMD2 632 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 PSMA7O14818 248 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 MEFVO15553 781 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 SKIP12755 728 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 PPP1R2P41236 205 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 TNFSF9P41273 254 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 GRM5P41594 1212 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 GATMP50440 423 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 STX17P56962 302 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 OSTNP61366 133 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 SNRPFP62306 86 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 TYRO3Q06418 890 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 STIM1Q13586 685 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 ANKRD40Q6AI12 368 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 CHRDL2Q6WN34 429 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 AGMOQ6ZNB7 445 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 NPAS4Q8IUM7 802 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 C12orf56Q8IXR9 622 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 RNPC3Q96LT9 517 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 ELAC1Q9H777 363 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 TMEM161AQ9NX61 479 aa21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 AGO2Q9UKV8 859 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-222ENST00000600320 OGTO15294 1046 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CALUO43852 315 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 UPP2O95045 317 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 LETM1O95202 739 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 NR3C1P04150 777 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 STAG3L1P0CL83 205 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 FGFR1P11362 822 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 ITGA4P13612 1032 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 AKAP5P24588 427 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 ACOT2P49753 483 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CYP2J2P51589 502 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 STX1AQ16623 288 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 FAM117BQ6P1L5 589 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CRELD2Q6UXH1 353 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 C11orf57Q6ZUT1 292 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 APBB1IPQ7Z5R6 666 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 TOP1MTQ969P6 601 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CXCL16Q9H2A7 254 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 DMAC2Q9NW81 257 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 HSPBP1Q9NZL4 362 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CGNQ9P2M7 1197 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 PCDHB7Q9Y5E2 793 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 SLC4A7Q9Y6M7 1214 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 CEP290O15078 2479 aa21.84■■□□□ 1.09
SHKBP1-222ENST00000600320 RECQL4O94761 1208 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 EOMESO95936 686 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 PAK1Q13153 545 aa21.83■■□□□ 1.09
SHKBP1-222ENST00000600320 CLLU1OSQ5K130 101 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms