RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM160A2Q8N612 972 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CEP89Q96ST8 783 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 AGPAT5Q9NUQ2 364 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 NDRG2Q9UN36 371 aaKnown RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 NOTCH4Q99466 2003 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 MAN2B1O00754 1011 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 CYP3A4P08684 503 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 HOXA9P31269 272 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 PRKCEQ02156 737 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 AP3B2Q13367 1082 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 USP41Q3LFD5 358 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 STPG1Q5TH74 334 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 DNASE1L2Q92874 299 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 LMAN1LQ9HAT1 526 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 LHX6Q9UPM6 363 aa19.8■□□□□ 0.76
SSBP4-207ENST00000600244 FLNBO75369 2602 aaKnown RBP19.79■□□□□ 0.76
SSBP4-207ENST00000600244 GREB1Q4ZG55 1949 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 TMEM8BA6NDV4 472 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 ZNF806P0C7X5 589 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 RXRAP19793 462 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 GAS6Q14393 721 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 POTEHQ6S545 545 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 MIOSQ9NXC5 875 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 KCNH3Q9ULD8 1083 aa19.79■□□□□ 0.76
SSBP4-207ENST00000600244 SDK1Q7Z5N4 2213 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 POU2F2P09086 479 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 NCLP19338 710 aaKnown RBP19.78■□□□□ 0.76
SSBP4-207ENST00000600244 HOXA11P31270 313 aaPredicted RBP19.78■□□□□ 0.76
SSBP4-207ENST00000600244 NAPAP54920 295 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 CREMQ03060 361 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 UGCGQ16739 394 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 PPM1LQ5SGD2 360 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 TTC22Q5TAA0 569 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 FUT10Q6P4F1 479 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 TMTC3Q6ZXV5 915 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 LONP2Q86WA8 852 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 MTA3Q9BTC8 594 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 COLEC11Q9BWP8 271 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 NIFKQ9BYG3 293 aaKnown RBP19.78■□□□□ 0.76
SSBP4-207ENST00000600244 IFT122Q9HBG6 1241 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 SAMM50Q9Y512 469 aa19.78■□□□□ 0.76
SSBP4-207ENST00000600244 GCN1Q92616 2671 aaKnown RBP19.78■□□□□ 0.76
SSBP4-207ENST00000600244 WDR64B1ANS9 1081 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 K7ESF4 209 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 CCL16O15467 120 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 C8AP07357 584 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 CHRNB1P11230 501 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 ADCY7P51828 1080 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 PPP1R18Q6NYC8 613 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 KSR1Q8IVT5 923 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 C12orf50Q8NA57 414 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-207ENST00000600244 SMG8Q8ND04 991 aaKnown RBP19.77■□□□□ 0.76
SSBP4-207ENST00000600244 CLSTN3Q9BQT9 956 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 UBN1Q9NPG3 1134 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 DISC1Q9NRI5 854 aa19.77■□□□□ 0.76
SSBP4-207ENST00000600244 SUCLA2Q9P2R7 463 aaPredicted RBP19.77■□□□□ 0.76
SSBP4-207ENST00000600244 DSPP15924 2871 aaKnown RBP19.76■□□□□ 0.75
SSBP4-207ENST00000600244 TAF4O00268 1085 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 XYLBO75191 536 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 STBD1O95210 358 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 PAPSS2O95340 614 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-207ENST00000600244 CALM1P0DP23 149 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 CALM2P0DP24 149 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 CALM3P0DP25 149 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 GSPT1P15170 499 aaKnown RBP19.76■□□□□ 0.75
SSBP4-207ENST00000600244 DNM2P50570 870 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 PTH1RQ03431 593 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 LIN9Q5TKA1 542 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 TANGO2Q6ICL3 276 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 PSAPL1Q6NUJ1 521 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 PRSS55Q6UWB4 352 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-207ENST00000600244 RHPN2Q8IUC4 686 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 TMTC2Q8N394 836 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 GATA6Q92908 595 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 ELSPBP1Q96BH3 223 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 GAD1Q99259 594 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 ARRDC1-AS1Q9H2J1 176 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 HCFC1R1Q9NWW0 138 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 DNMT3BQ9UBC3 853 aaKnown RBP19.76■□□□□ 0.75
SSBP4-207ENST00000600244 TCEAL9Q9UHQ7 104 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 POLIQ9UNA4 740 aa19.76■□□□□ 0.75
SSBP4-207ENST00000600244 SMCO2A6NFE2 343 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 ARL5CA6NH57 179 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 NR1I2O75469 434 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 SETQ01105 290 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-207ENST00000600244 SPEM1Q8N4L4 309 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 FANCBQ8NB91 859 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 CNNM3Q8NE01 707 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 ING5Q8WYH8 240 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 FAM3CQ92520 227 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 MCRS1Q96EZ8 462 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 RNF39Q9H2S5 420 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 GDE1Q9NZC3 331 aa19.75■□□□□ 0.75
SSBP4-207ENST00000600244 AXIN1O15169 862 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 ITGA4P13612 1032 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 CCDC6Q16204 474 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 MTERF2Q49AM1 385 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 PABPC1LQ4VXU2 614 aaKnown RBP19.74■□□□□ 0.75
SSBP4-207ENST00000600244 RTP2Q5QGT7 225 aa19.74■□□□□ 0.75
SSBP4-207ENST00000600244 NFXL1Q6ZNB6 911 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms