RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 XXYLT1Q8NBI6 393 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 ERCC4Q92889 916 aaPredicted RBP13.42□□□□□ -0.26
TGFB1-204ENST00000600196 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 VWCEQ96DN2 955 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 ADAM2Q99965 735 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
TGFB1-204ENST00000600196 TRIM6Q9C030 488 aaPredicted RBP13.42□□□□□ -0.26
TGFB1-204ENST00000600196 SEMA6BQ9H3T3 888 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 TOPORSQ9NS56 1045 aaPredicted RBP13.42□□□□□ -0.26
TGFB1-204ENST00000600196 FAM105AQ9NUU6 356 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 AGO2Q9UKV8 859 aaKnown RBP13.42□□□□□ -0.26
TGFB1-204ENST00000600196 GIT1Q9Y2X7 761 aa13.42□□□□□ -0.26
TGFB1-204ENST00000600196 SIP14410 1827 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 BIN1O00499 593 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 IKBKBO14920 756 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 SLC16A3O15427 465 aaKnown RBP13.41□□□□□ -0.26
TGFB1-204ENST00000600196 B4GALT5O43286 388 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 EXTL3O43909 919 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 AMHP03971 560 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ADSSP30520 456 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 KCNA1Q09470 495 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ADAM9Q13443 819 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 DPCR1Q3MIW9 517 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ZNF568Q3ZCX4 644 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 RASIP1Q5U651 963 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 LRSAM1Q6UWE0 723 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
TGFB1-204ENST00000600196 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
TGFB1-204ENST00000600196 CRIPAKQ8N1N5 446 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 NELFBQ8WX92 580 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 POMGNT1Q8WZA1 660 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ZNF668Q96K58 619 aaPredicted RBP13.41□□□□□ -0.26
TGFB1-204ENST00000600196 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 MSTO1Q9BUK6 570 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 FGFBP2Q9BYJ0 223 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 CDT1Q9H211 546 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ASB7Q9H672 318 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
TGFB1-204ENST00000600196 KANSL3Q9P2N6 904 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
TGFB1-204ENST00000600196 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 IL18RAPO95256 599 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 NR3C1P04150 777 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 PAX3P23760 479 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 AP3M2P53677 418 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 YARSP54577 528 aaKnown RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 MARSP56192 900 aaKnown RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 MLLT1Q03111 559 aaPredicted RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 XKR4Q5GH76 650 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 SLC39A4Q6P5W5 647 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 DEFB128Q7Z7B8 93 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 GLIS3Q8NEA6 775 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 TOP1MTQ969P6 601 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 ACAP3Q96P50 834 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 GDF15Q99988 308 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 HSPBP1Q9NZL4 362 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 CPSF3Q9UKF6 684 aaKnown RBP13.4□□□□□ -0.26
TGFB1-204ENST00000600196 FRMD4BQ9Y2L6 1034 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 DERAQ9Y315 318 aa13.4□□□□□ -0.26
TGFB1-204ENST00000600196 SYCE3A1L190 88 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 FAM189A1O60320 539 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 FGFR4P22455 802 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
TGFB1-204ENST00000600196 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
TGFB1-204ENST00000600196 C16orf59Q7L2K0 433 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 FRMD5Q7Z6J6 570 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 TMC2Q8TDI7 906 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 IPPQ9Y573 584 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
TGFB1-204ENST00000600196 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 A0A1W2PPC1 479 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 TTLL13PA6NNM8 815 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
TGFB1-204ENST00000600196 STX10O60499 249 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 MGEA5O60502 916 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 EXOC3O60645 756 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 EDN1P05305 212 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 ITGA4P13612 1032 aa13.38□□□□□ -0.27
TGFB1-204ENST00000600196 NR2F2P24468 414 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms