RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 CLCN4P51793 760 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 DSC1Q08554 894 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 GRIK3Q13003 919 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 PPP2R5AQ15172 486 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 MAPK6Q16659 721 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 CDCA2Q69YH5 1023 aaPredicted RBP10.84□□□□□ -0.67
VRK3-216ENST00000599342 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 CCDC149Q6ZUS6 474 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 CDR2LQ86X02 465 aaPredicted RBP10.84□□□□□ -0.67
VRK3-216ENST00000599342 KREMEN2Q8NCW0 462 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 DEPTORQ8TB45 409 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 ADPGKQ9BRR6 497 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 COLEC11Q9BWP8 271 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 RAB34Q9BZG1 259 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 DPP7Q9UHL4 492 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 SORCS3Q9UPU3 1222 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 ZMYM2Q9UBW7 1377 aa10.84□□□□□ -0.67
VRK3-216ENST00000599342 GLUD1P00367 558 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 PRKCBP05771 671 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 LIG1P18858 919 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 CYP11B2P19099 503 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 CCT6AP40227 531 aaKnown RBP10.83□□□□□ -0.68
VRK3-216ENST00000599342 NAMPTP43490 491 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
VRK3-216ENST00000599342 PRPF4BQ13523 1007 aaKnown RBP10.83□□□□□ -0.68
VRK3-216ENST00000599342 FAM187BQ17R55 369 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 KANK3Q6NY19 840 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 UBALD2Q8IYN6 164 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 FBXL6Q8N531 539 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
VRK3-216ENST00000599342 ASIC4Q96FT7 647 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 IFT74Q96LB3 600 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 PRRX2Q99811 253 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 KLK14Q9P0G3 267 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 LRWD1Q9UFC0 647 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 KIF3AQ9Y496 699 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 STK24Q9Y6E0 443 aa10.83□□□□□ -0.68
VRK3-216ENST00000599342 TEX28O15482 410 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 ST18O60284 1047 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 LILRB3O75022 631 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 DSG1Q02413 1049 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 NHLH1Q02575 133 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 CREMQ03060 361 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 NBR1Q14596 966 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 USP41Q3LFD5 358 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 C8orf34Q49A92 452 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 FUT10Q6P4F1 479 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 C15orf39Q6ZRI6 1047 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 GPR149Q86SP6 731 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 RNF168Q8IYW5 571 aaPredicted RBP10.82□□□□□ -0.68
VRK3-216ENST00000599342 ZDHHC14Q8IZN3 488 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 SNX29Q8TEQ0 813 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 BSNDQ8WZ55 320 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 KIFAP3Q92845 792 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 BHMT2Q9H2M3 363 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 FZD8Q9H461 694 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.82□□□□□ -0.68
VRK3-216ENST00000599342 ADAM28Q9UKQ2 775 aa10.82□□□□□ -0.68
VRK3-216ENST00000599342 F8W810 466 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 LAD1O00515 517 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 ACKR2O00590 384 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 TADA2AO75478 443 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 RECQL4O94761 1208 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 ASGR2P07307 311 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 U2AF2P26368 475 aaKnown RBP eCLIP10.81□□□□□ -0.68
VRK3-216ENST00000599342 EFNA5P52803 228 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 PTPN5P54829 565 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 TUSC3Q13454 348 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 PDIA5Q14554 519 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 DCAF4L1Q3SXM0 396 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 KIAA0319Q5VV43 1072 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 KRT79Q5XKE5 535 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 OTOP3Q7RTS5 596 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 ALYREFQ86V81 257 aaKnown RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 GSTCDQ8NEC7 633 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 KIF2CQ99661 725 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 PDZD7Q9H5P4 517 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 DDX19AQ9NUU7 478 aaKnown RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 SNTG2Q9NY99 539 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 LIMD1Q9UGP4 676 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
VRK3-216ENST00000599342 TDRD15B5MCY1 1934 aaKnown RBP10.81□□□□□ -0.68
VRK3-216ENST00000599342 SF3B1O75533 1304 aaKnown RBP eCLIP10.81□□□□□ -0.683e-6■■■■■ 137.9
VRK3-216ENST00000599342 TECTAO75443 2155 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 CCDC195A0A1B0GUA6 201 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 BRD1O95696 1058 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 THP07101 528 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 PTGDRQ13258 359 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 RABEP1Q15276 862 aa10.8□□□□□ -0.68
VRK3-216ENST00000599342 ECM1Q16610 540 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms