RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 CASP10Q92851 521 aa16.11■□□□□ 0.17
XRCC1-208ENST00000598422 KLK14Q9P0G3 267 aa16.11■□□□□ 0.17
XRCC1-208ENST00000598422 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
XRCC1-208ENST00000598422 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 NRP1O14786 923 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 RECQL4O94761 1208 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 URODP06132 367 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 SYT1P21579 422 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 GUCY2CP25092 1073 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 NPTX2P47972 431 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 ATF7IP2Q5U623 682 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 COLGALT2Q8IYK4 626 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 PNMA5Q96PV4 448 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 C1QTNF1Q9BXJ1 281 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 C17orf75Q9HAS0 396 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
XRCC1-208ENST00000598422 USP20Q9Y2K6 914 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
XRCC1-208ENST00000598422 HCFC2Q9Y5Z7 792 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 REV3LO60673 3130 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 MYO7AQ13402 2215 aa16.1■□□□□ 0.17
XRCC1-208ENST00000598422 CLASP2O75122 1294 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 HSP90AA1P07900 732 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 HOXB8P17481 243 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 DSC1Q08554 894 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 PTPN14Q15678 1187 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 TPRNQ4KMQ1 711 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 EEF1DP3Q658K8 133 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 ANKRD54Q6NXT1 300 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 DAW1Q8N136 415 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 SYT2Q8N9I0 419 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 EMILIN2Q9BXX0 1053 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 MRPL4Q9BYD3 311 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 MRPL17Q9NRX2 175 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 SNTG2Q9NY99 539 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 KCNG1Q9UIX4 513 aa16.09■□□□□ 0.17
XRCC1-208ENST00000598422 RBM19Q9Y4C8 960 aaKnown RBP16.09■□□□□ 0.17
XRCC1-208ENST00000598422 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 SMTNP53814 917 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 STRN3Q13033 797 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 RESTQ13127 1097 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 MAPK7Q13164 816 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 ZNF568Q3ZCX4 644 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 HERC2P3Q9BVR0 1158 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 APOL5Q9BWW9 433 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 TMEM134Q9H6X4 195 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 DZANK1Q9NVP4 752 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 MARCH5Q9NX47 278 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 MIOSQ9NXC5 875 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 ARHGAP28Q9P2N2 729 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 SSX2IPQ9Y2D8 614 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 GDAQ9Y2T3 454 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 IRAK3Q9Y616 596 aa16.08■□□□□ 0.16
XRCC1-208ENST00000598422 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 C2CD2LO14523 706 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 SLC16A4O15374 487 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 SOD2P04179 222 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 EDN1P05305 212 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
XRCC1-208ENST00000598422 PLS3P13797 630 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 SLC12A3P55017 1021 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 KCNC3Q14003 757 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
XRCC1-208ENST00000598422 NT5DC1Q5TFE4 455 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 GSTCDQ8NEC7 633 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 SPIRE2Q8WWL2 714 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-208ENST00000598422 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 CLIC4Q9Y696 253 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 PLXNA4Q9HCM2 1894 aa16.07■□□□□ 0.16
XRCC1-208ENST00000598422 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 SF3B1O75533 1304 aaKnown RBP eCLIP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 CASTOR2A6NHX0 329 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 H0YCG3 227 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 STX6O43752 255 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 THP07101 528 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 PLCG1P19174 1290 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 KLRC2P26717 231 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 TXLNAP40222 546 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 GLUD2P49448 558 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 YARSP54577 528 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 CEBPZQ03701 1054 aaKnown RBP16.06■□□□□ 0.16
XRCC1-208ENST00000598422 GRIN1Q05586 938 aa16.06■□□□□ 0.16
XRCC1-208ENST00000598422 TUSC3Q13454 348 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms