RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HAUS6Q7Z4H7 955 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 APBB1IPQ7Z5R6 666 aaPredicted RBP15.22■□□□□ 0.03
UPF1-205ENST00000598209 ZNF280BQ86YH2 543 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.22■□□□□ 0.03
UPF1-205ENST00000598209 SLC39A11Q8N1S5 342 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 DDX12PQ92771 950 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 ZFP42Q96MM3 310 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 FAM193BQ96PV7 902 aaPredicted RBP15.22■□□□□ 0.03
UPF1-205ENST00000598209 TARS2Q9BW92 718 aaKnown RBP15.22■□□□□ 0.03
UPF1-205ENST00000598209 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
UPF1-205ENST00000598209 SNTG2Q9NY99 539 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
UPF1-205ENST00000598209 BRWD1Q9NSI6 2320 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 CARNS1A5YM72 827 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 NT5C1B-RDH14C9J2C7 533 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 K7ENM7 598 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 TRAK2O60296 914 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 B4GALT3O60512 393 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 DDHD2O94830 711 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 SCNN1GP51170 649 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 E2F4Q16254 413 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 ZNF568Q3ZCX4 644 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 TCEAL5Q5H9L2 206 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 LEO1Q8WVC0 666 aaPredicted RBP15.21■□□□□ 0.03
UPF1-205ENST00000598209 MRPS27Q92552 414 aaKnown RBP15.21■□□□□ 0.03
UPF1-205ENST00000598209 DHX58Q96C10 678 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 MIOSQ9NXC5 875 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 FAM13BQ9NYF5 915 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 THEGQ9P2T0 379 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 DNAJB4Q9UDY4 337 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
UPF1-205ENST00000598209 RECQL4O94761 1208 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 GALTP07902 379 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 IRS1P35568 1242 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 SLC11A1P49279 550 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 KRT17Q04695 432 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 RESP18Q5W5W9 173 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 ZBTB33Q86T24 672 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 KCNN1Q92952 543 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 DNAJC19Q96DA6 116 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 RPS6KC1Q96S38 1066 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 FIZ1Q96SL8 496 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 CDT1Q9H211 546 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 PTPRHQ9HD43 1115 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 TLR9Q9NR96 1032 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 PUF60Q9UHX1 559 aaKnown RBP15.2■□□□□ 0.02
UPF1-205ENST00000598209 GDAQ9Y2T3 454 aa15.2■□□□□ 0.02
UPF1-205ENST00000598209 PDCD11Q14690 1871 aaKnown RBP15.2■□□□□ 0.02
UPF1-205ENST00000598209 ABLIM1O14639 778 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 SCP2P22307 547 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 PROZP22891 400 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 NMT1P30419 496 aaKnown RBP15.19■□□□□ 0.02
UPF1-205ENST00000598209 ERVFC1P60507 584 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 NUCB2P80303 420 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 GRIK3Q13003 919 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 TMEM173Q86WV6 379 aaPredicted RBP15.19■□□□□ 0.02
UPF1-205ENST00000598209 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 COLGALT2Q8IYK4 626 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 STAMQ92783 540 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 BICD1Q96G01 975 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 TMEM169Q96HH4 297 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 IGSF21Q96ID5 467 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 ZBTB45Q96K62 511 aaPredicted RBP15.19■□□□□ 0.02
UPF1-205ENST00000598209 TCHPQ9BT92 498 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 TNMDQ9H2S6 317 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 TBX20Q9UMR3 447 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 PCDHGC5Q9Y5F6 944 aa15.19■□□□□ 0.02
UPF1-205ENST00000598209 FSCN2O14926 492 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 POLR2DO15514 142 aaKnown RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 TOM1L1O75674 476 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 ALDH2P05091 517 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 MCF2P10911 925 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 IDEP14735 1019 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 GAP43P17677 238 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 GRM5P41594 1212 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 GTF2BQ00403 316 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 DSC1Q08554 894 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 PDE12Q6L8Q7 609 aaKnown RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 ADGRD2Q7Z7M1 963 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 CEP120Q8N960 986 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 BCL7CQ8WUZ0 217 aaPredicted RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 HLA-CQ95604 372 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 CCDC94Q9BW85 323 aaPredicted RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
UPF1-205ENST00000598209 KBTBD4Q9NVX7 518 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 ANKFY1Q9P2R3 1169 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 SEL1LQ9UBV2 794 aa15.18■□□□□ 0.02
UPF1-205ENST00000598209 COG5Q9UP83 839 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms