RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PTPRZ1P23471 2315 aaPredicted RBP18.88■□□□□ 0.61
PNKP-210ENST00000597965 SCNN1GP51170 649 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 ANAPC15P60006 121 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 MBTD1Q05BQ5 628 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 GRIK3Q13003 919 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 SIX5Q8N196 739 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 OXER1Q8TDS5 423 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 SNX27Q96L92 541 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 PRIMPOLQ96LW4 560 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 HSD17B14Q9BPX1 270 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 TTC12Q9H892 705 aaPredicted RBP18.88■□□□□ 0.61
PNKP-210ENST00000597965 CHST7Q9NS84 486 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 EPS15L1Q9UBC2 864 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 CLUHO75153 1309 aa18.88■□□□□ 0.61
PNKP-210ENST00000597965 PRR23AA6NEV1 266 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 EFEMP2O95967 443 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 RFX1P22670 979 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 ARL2P36404 184 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 CAPSQ13938 189 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 TRIM29Q14134 588 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 CCDC105Q8IYK2 499 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 SMG7Q92540 1137 aaKnown RBP18.87■□□□□ 0.61
PNKP-210ENST00000597965 ZFP42Q96MM3 310 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 XPNPEP1Q9NQW7 623 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 ADAM28Q9UKQ2 775 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 TPCN1Q9ULQ1 816 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 ZFP37Q9Y6Q3 630 aaPredicted RBP18.87■□□□□ 0.61
PNKP-210ENST00000597965 MYO15AQ9UKN7 3530 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 CFAP54Q96N23 3096 aa18.87■□□□□ 0.61
PNKP-210ENST00000597965 PLXNA3P51805 1871 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 SF3B1O75533 1304 aaKnown RBP eCLIP18.86■□□□□ 0.61
PNKP-210ENST00000597965 A0A1B0GUA9 196 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 STK25O00506 426 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 ZBTB39O15060 712 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 NEMFO60524 1076 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 EIF5BO60841 1220 aaKnown RBP18.86■□□□□ 0.61
PNKP-210ENST00000597965 TADA2AO75478 443 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 PAPLNO95428 1278 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 ARF4P18085 180 aaPredicted RBP18.86■□□□□ 0.61
PNKP-210ENST00000597965 RARRES1P49788 294 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 CWF19L1Q69YN2 538 aaKnown RBP18.86■□□□□ 0.61
PNKP-210ENST00000597965 TAS1R1Q7RTX1 841 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 MCPH1Q8NEM0 835 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 APOL6Q9BWW8 343 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 RNF39Q9H2S5 420 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 NXF3Q9H4D5 531 aaKnown RBP18.86■□□□□ 0.61
PNKP-210ENST00000597965 HES2Q9Y543 173 aa18.86■□□□□ 0.61
PNKP-210ENST00000597965 MTCL1Q9Y4B5 1905 aaKnown RBP18.85■□□□□ 0.61
PNKP-210ENST00000597965 SRFP11831 508 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 NR5A1Q13285 461 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 PDXDC1Q6P996 788 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 ZBTB8OSQ8IWT0 167 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 SEMA4AQ9H3S1 761 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 GJB4Q9NTQ9 266 aa18.85■□□□□ 0.61
PNKP-210ENST00000597965 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
PNKP-210ENST00000597965 NPR3P17342 541 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 GLRA2P23416 452 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 TXKP42681 527 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 AMHR2Q16671 573 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 EARS2Q5JPH6 523 aaKnown RBP18.84■□□□□ 0.61
PNKP-210ENST00000597965 ASCL5Q7RTU5 278 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 PALB2Q86YC2 1186 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 DTWD2Q8NBA8 298 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 RIN2Q8WYP3 895 aaPredicted RBP18.84■□□□□ 0.61
PNKP-210ENST00000597965 PRKD2Q9BZL6 878 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 NT5C3AQ9H0P0 336 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 C2orf40Q9H1Z8 148 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 MIOSQ9NXC5 875 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 PARP2Q9UGN5 583 aa18.84■□□□□ 0.61
PNKP-210ENST00000597965 RIF1Q5UIP0 2472 aaKnown RBP18.84■□□□□ 0.61
PNKP-210ENST00000597965 LRRIQ4A6NIV6 560 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 TGM5O43548 720 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 RFPL2O75678 378 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 CTDNEP1O95476 244 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 NPTXRO95502 500 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 AKAP5P24588 427 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 ELAVL2Q12926 359 aaKnown RBP18.83■□□□□ 0.6
PNKP-210ENST00000597965 HSP90AA2PQ14568 343 aaPredicted RBP18.83■□□□□ 0.6
PNKP-210ENST00000597965 ANGPT1Q15389 498 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 PPP4R3CPQ6ZMV5 832 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 SLC44A3Q8N4M1 653 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 TNFRSF25Q93038 417 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 ADPGKQ9BRR6 497 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 POLR3FQ9H1D9 316 aaPredicted RBP18.83■□□□□ 0.6
PNKP-210ENST00000597965 FAM186AA6NE01 2351 aa18.83■□□□□ 0.6
PNKP-210ENST00000597965 N4BP3O15049 544 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 N4BP1O75113 896 aaKnown RBP18.82■□□□□ 0.6
PNKP-210ENST00000597965 CFHP08603 1231 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 LAMP2P13473 410 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 TUSC3Q13454 348 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 TMEM132AQ24JP5 1023 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 GSTCDQ8NEC7 633 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 ERMNQ8TAM6 284 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 NACC1Q96RE7 527 aa18.82■□□□□ 0.6
PNKP-210ENST00000597965 GPR62Q9BZJ7 368 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms