RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 LAMA3Q16787 3333 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 ABLIM1O14639 778 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 DGKIO75912 1065 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 KIF20AO95235 890 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 ITGA4P13612 1032 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 HTRA4P83105 476 aaPredicted RBP15.71■□□□□ 0.11
VRK3-213ENST00000597215 MCL1Q07820 350 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 RAB30Q15771 203 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 SLFN12LQ6IEE8 588 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 SLC39A4Q6P5W5 647 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 ZBTB33Q86T24 672 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 ABI1Q8IZP0 508 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 RSPH1Q8WYR4 309 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
VRK3-213ENST00000597215 UBN1Q9NPG3 1134 aa15.71■□□□□ 0.11
VRK3-213ENST00000597215 FNDC1Q4ZHG4 1894 aaPredicted RBP15.7■□□□□ 0.1
VRK3-213ENST00000597215 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 FGFR1P11362 822 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 HARSP12081 509 aaKnown RBP15.7■□□□□ 0.1
VRK3-213ENST00000597215 RABGGTBP53611 331 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 ZNF658Q5TYW1 1059 aaPredicted RBP15.7■□□□□ 0.1
VRK3-213ENST00000597215 GLB1LQ6UWU2 654 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 AGMOQ6ZNB7 445 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 NELFCDQ8IXH7 590 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 LPPQ93052 612 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 ZNF689Q96CS4 500 aaPredicted RBP15.7■□□□□ 0.1
VRK3-213ENST00000597215 CCDC94Q9BW85 323 aaPredicted RBP15.7■□□□□ 0.1
VRK3-213ENST00000597215 APOL6Q9BWW8 343 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 TMEM117Q9H0C3 514 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 GBP3Q9H0R5 595 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 RSAD1Q9HA92 442 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 RNF19AQ9NV58 838 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 KIAA1468Q9P260 1216 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 MSRAQ9UJ68 235 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 MAN1B1Q9UKM7 699 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 GDAQ9Y2T3 454 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 HES2Q9Y543 173 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 STYXL1Q9Y6J8 313 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 ZMYM2Q9UBW7 1377 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 COL4A6Q14031 1691 aa15.7■□□□□ 0.1
VRK3-213ENST00000597215 A0A0B4J269 797 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 TISP43B9A030 160 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 OGTO15294 1046 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 HOXD13P35453 343 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 GRM5P41594 1212 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 SNRPFP62306 86 aaKnown RBP15.69■□□□□ 0.1
VRK3-213ENST00000597215 KYAT1Q16773 422 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 KNOP1Q1ED39 458 aaKnown RBP15.69■□□□□ 0.1
VRK3-213ENST00000597215 CLLU1OSQ5K130 101 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 HS2ST1Q7LGA3 356 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 CMTR2Q8IYT2 770 aaKnown RBP15.69■□□□□ 0.1
VRK3-213ENST00000597215 POMGNT1Q8WZA1 660 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 MSTO1Q9BUK6 570 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 PBX4Q9BYU1 374 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 HAPLN2Q9GZV7 340 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 IKZF4Q9H2S9 585 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 RC3H2Q9HBD1 1191 aaKnown RBP15.69■□□□□ 0.1
VRK3-213ENST00000597215 SNTG2Q9NY99 539 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 PARP2Q9UGN5 583 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 GIT1Q9Y2X7 761 aa15.69■□□□□ 0.1
VRK3-213ENST00000597215 TBKBP1A7MCY6 615 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 RECQL4O94761 1208 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 GARTP22102 1010 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 AKAP5P24588 427 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 DNAJB2P25686 324 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 GATMP50440 423 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 BTG3Q14201 252 aaPredicted RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 PAN2Q504Q3 1202 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 COBLL1Q53SF7 1204 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 ARMCX5Q6P1M9 558 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 GUF1Q8N442 669 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 CEP120Q8N960 986 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 GOLGA5Q8TBA6 731 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 URGCPQ8TCY9 931 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 HELQQ8TDG4 1101 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 ACAP3Q96P50 834 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 CASD1Q96PB1 797 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 MRPL9Q9BYD2 267 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 CGNQ9P2M7 1197 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 AGO2Q9UKV8 859 aaKnown RBP15.68■□□□□ 0.1
VRK3-213ENST00000597215 CITO14578 2027 aa15.68■□□□□ 0.1
VRK3-213ENST00000597215 BIN1O00499 593 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 KIAA0391O15091 583 aaKnown RBP15.67■□□□□ 0.1
VRK3-213ENST00000597215 TGFB1I1O43294 461 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 OFD1O75665 1012 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 MYOGP15173 224 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 ADSSP30520 456 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 PBX2P40425 430 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 PPP1R2P41236 205 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 OSTNP61366 133 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 STIM1Q13586 685 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 MORC3Q14149 939 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 NOMO2Q5JPE7 1267 aa15.67■□□□□ 0.1
VRK3-213ENST00000597215 HABP4Q5JVS0 413 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms