RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ALCAMQ13740 583 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
SMCO4-206ENST00000596676 RBM43Q6ZSC3 357 aaKnown RBP16.97■□□□□ 0.31
SMCO4-206ENST00000596676 THNSL1Q8IYQ7 743 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 SAAL1Q96ER3 474 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 C1orf112Q9NSG2 853 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 SNTG2Q9NY99 539 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 KLK14Q9P0G3 267 aa16.97■□□□□ 0.31
SMCO4-206ENST00000596676 A0A0B4J269 797 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 MYOGP15173 224 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 MCL1Q07820 350 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 CLLU1OSQ5K130 101 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 KLHL10Q6JEL2 608 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 MRPL10Q7Z7H8 261 aaKnown RBP16.96■□□□□ 0.31
SMCO4-206ENST00000596676 ADSSL1Q8N142 457 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.31
SMCO4-206ENST00000596676 TOP1MTQ969P6 601 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 CCDC51Q96ER9 411 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 TRAIPQ9BWF2 469 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 AGPAT3Q9NRZ7 376 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 EXOC7Q9UPT5 735 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 STYXL1Q9Y6J8 313 aa16.96■□□□□ 0.31
SMCO4-206ENST00000596676 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
SMCO4-206ENST00000596676 TRIM49BA6NDI0 452 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 CLDN3O15551 220 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 FAM189A1O60320 539 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 MCF2P10911 925 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 ATP2A2P16615 1042 aaKnown RBP16.95■□□□□ 0.3
SMCO4-206ENST00000596676 PTMSP20962 102 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 ACOT2P49753 483 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMCO4-206ENST00000596676 DPCR1Q3MIW9 517 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
SMCO4-206ENST00000596676 POMGNT1Q8WZA1 660 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 ADPGKQ9BRR6 497 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 MSTO1Q9BUK6 570 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 TRIM6Q9C030 488 aaPredicted RBP16.95■□□□□ 0.3
SMCO4-206ENST00000596676 MIOSQ9NXC5 875 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 HCSTQ9UBK5 93 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 PARP2Q9UGN5 583 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 UBE4BO95155 1302 aa16.95■□□□□ 0.3
SMCO4-206ENST00000596676 COL4A6Q14031 1691 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 EFCAB14O75071 495 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 ZNF623O75123 536 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 STAG3L1P0CL83 205 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 ITGA4P13612 1032 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 SCP2P22307 547 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 CYP2J2P51589 502 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 STX17P56962 302 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 NLRP12P59046 1061 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 DCAF4L1Q3SXM0 396 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 PAN2Q504Q3 1202 aaKnown RBP16.94■□□□□ 0.3
SMCO4-206ENST00000596676 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 ARMCX5Q6P1M9 558 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
SMCO4-206ENST00000596676 NPAS4Q8IUM7 802 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 HERC6Q8IVU3 1022 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 TDHQ8IZJ6 230 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 HELQQ8TDG4 1101 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 EEF2KMTQ96G04 330 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 ZFP42Q96MM3 310 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 MED15Q96RN5 788 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 TMEM161AQ9NX61 479 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 AGO2Q9UKV8 859 aaKnown RBP16.94■□□□□ 0.3
SMCO4-206ENST00000596676 LRFN2Q9ULH4 789 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 CTNND2Q9UQB3 1225 aa16.94■□□□□ 0.3
SMCO4-206ENST00000596676 TRIP11Q15643 1979 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 LAMA2P24043 3122 aaKnown RBP16.93■□□□□ 0.3
SMCO4-206ENST00000596676 LCHNA4D1U4 455 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 TULP1O00294 542 aaPredicted RBP16.93■□□□□ 0.3
SMCO4-206ENST00000596676 OFD1O75665 1012 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 RECQL4O94761 1208 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 ARHGEF15O94989 841 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 ABCD1P33897 745 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 PBX2P40425 430 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 GRM5P41594 1212 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 WNT7BP56706 349 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
SMCO4-206ENST00000596676 TRIML1Q8N9V2 468 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 RDH13Q8NBN7 331 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 FAM84AQ96KN4 292 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 FAM213AQ9BRX8 229 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
SMCO4-206ENST00000596676 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
SMCO4-206ENST00000596676 INPP5FQ9Y2H2 1132 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 GBF1Q92538 1859 aa16.93■□□□□ 0.3
SMCO4-206ENST00000596676 SYCE3A1L190 88 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 PDXKO00764 312 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 OGTO15294 1046 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 DGKIO75912 1065 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 GJB5O95377 273 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 EOMESO95936 686 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 GARTP22102 1010 aa16.92■□□□□ 0.3
SMCO4-206ENST00000596676 CASP4P49662 377 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms