RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CLDN3O15551 220 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 CAND2O75155 1236 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 CHRNA1P02708 482 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 UBXN1Q04323 297 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 CYP24A1Q07973 514 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 RBL2Q08999 1139 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 BFSP1Q12934 665 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 NOLC1Q14978 699 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 PTPN21Q16825 1174 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 TMC2Q8TDI7 906 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 SENP6Q9GZR1 1112 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 CDT1Q9H211 546 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 ANKFY1Q9P2R3 1169 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 CDY2AQ9Y6F7 541 aa16.06■□□□□ 0.16
SHKBP1-211ENST00000595945 A0A1B0GUA9 196 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 OGTO15294 1046 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 ERLIN2O94905 339 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 MCF2P10911 925 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 FGFR4P22455 802 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 AXLP30530 894 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 ZBTB41Q5SVQ8 909 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 FKBP15Q5T1M5 1219 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 SPECC1LQ69YQ0 1117 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 ZBTB33Q86T24 672 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 RDH13Q8NBN7 331 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 CPB2Q96IY4 423 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 TRPV6Q9H1D0 765 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 SIK3Q9Y2K2 1263 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
SHKBP1-211ENST00000595945 M0QZ92 97 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 B4GALT4O60513 344 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 COL6A1P12109 1028 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 KRT13P13646 458 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 SFPQP23246 707 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 GJA8P48165 433 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 VAMP7P51809 220 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 PSMD6Q15008 389 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 ZNF568Q3ZCX4 644 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 TRAF7Q6Q0C0 670 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 FAM228AQ86W67 206 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 BRSK2Q8IWQ3 736 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 FAM126BQ8IXS8 530 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 DRC7Q8IY82 874 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 TCHPQ9BT92 498 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 CPSF3Q9UKF6 684 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 NOC2LQ9Y3T9 749 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-211ENST00000595945 GTPBP10A4D1E9 387 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 PMM2O15305 246 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 CD4P01730 458 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 TRIM49P0CI25 452 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 TRIM49CP0CI26 452 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 CAPN2P17655 700 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 THPOP40225 353 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 FMO5P49326 533 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 WNT7BP56706 349 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 DLG4P78352 724 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 CLDN10P78369 228 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 POU5F1Q01860 360 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 KCNMA1Q12791 1236 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 SYCP1Q15431 976 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 DCAF17Q5H9S7 520 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 NOD1Q9Y239 953 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 DNAH12Q6ZR08 3092 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 TET1Q8NFU7 2136 aa16.03■□□□□ 0.16
SHKBP1-211ENST00000595945 LRRIQ3A6PVS8 624 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 PES1O00541 588 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 CTSHP09668 335 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 GTF2H1P32780 548 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 TNFSF9P41273 254 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 ACOT2P49753 483 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 PPP3CAQ08209 521 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 FBXO47Q5MNV8 452 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 TCERG1LQ5VWI1 586 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 CEP120Q8N960 986 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 CCDC51Q96ER9 411 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 SQORQ9Y6N5 450 aa16.02■□□□□ 0.16
SHKBP1-211ENST00000595945 SCN5AQ14524 2016 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms