RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 BORCS6Q96GS4 357 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 MAP7D2Q96T17 732 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 PPP1R12CQ9BZL4 782 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 CCDC113Q9H0I3 377 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 NDST4Q9H3R1 872 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 FRMD4BQ9Y2L6 1034 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 STYXL1Q9Y6J8 313 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 REV3LO60673 3130 aa14.7□□□□□ -0.06
VMP1-217ENST00000593168 ADSSP30520 456 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 CYP2J2P51589 502 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 GSDMDP57764 484 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 MCCD1P59942 119 aaPredicted RBP14.69□□□□□ -0.06
VMP1-217ENST00000593168 TBX2Q13207 712 aaPredicted RBP14.69□□□□□ -0.06
VMP1-217ENST00000593168 CCDC85BQ15834 202 aaPredicted RBP14.69□□□□□ -0.06
VMP1-217ENST00000593168 MAPK6Q16659 721 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 FKBP15Q5T1M5 1219 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 SLFN12LQ6IEE8 588 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 SLC39A4Q6P5W5 647 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 CCDC186Q7Z3E2 898 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 FAM126BQ8IXS8 530 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 FAM186BQ8IYM0 893 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 ZNF710Q8N1W2 664 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 TMEM199Q8N511 208 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 ATXN2LQ8WWM7 1075 aaKnown RBP14.69□□□□□ -0.06
VMP1-217ENST00000593168 VTI1AQ96AJ9 217 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 ASB2Q96Q27 587 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 CBWD1Q9BRT8 395 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 FZD8Q9H461 694 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 HSPBP1Q9NZL4 362 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 THEGQ9P2T0 379 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.69□□□□□ -0.06
VMP1-217ENST00000593168 SIP14410 1827 aa14.69□□□□□ -0.06
VMP1-217ENST00000593168 MYO9BQ13459 2157 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 SCN10AQ9Y5Y9 1956 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
VMP1-217ENST00000593168 C17orf102A2RUQ5 167 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 TISP43B9A030 160 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 ARVCFO00192 962 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 HNRNPDLO14979 420 aaKnown RBP14.68□□□□□ -0.06
VMP1-217ENST00000593168 CYP2C18P33260 490 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 PHKA2P46019 1235 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 LIG4P49917 911 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 CHMP4BP1P59074 171 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 HSP90AA2PQ14568 343 aaPredicted RBP14.68□□□□□ -0.06
VMP1-217ENST00000593168 FAM187BQ17R55 369 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 PSRC1Q6PGN9 363 aaPredicted RBP14.68□□□□□ -0.06
VMP1-217ENST00000593168 CXCL17Q6UXB2 119 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 ZNF410Q86VK4 478 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 C7orf31Q8N865 590 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 ADAMTS19Q8TE59 1207 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 BICD1Q96G01 975 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 FBXL18Q96ME1 805 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 ERGIC2Q96RQ1 377 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 MRPL4Q9BYD3 311 aaKnown RBP14.68□□□□□ -0.06
VMP1-217ENST00000593168 IFT122Q9HBG6 1241 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 HDAC6Q9UBN7 1215 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 AKT3Q9Y243 479 aa14.68□□□□□ -0.06
VMP1-217ENST00000593168 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.06
VMP1-217ENST00000593168 PES1O00541 588 aaKnown RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 ACKR2O00590 384 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 CABYRO75952 493 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 CD4P01730 458 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 PRKCBP05771 671 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 CYP2C9P11712 490 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 GPC3P51654 580 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 ENPEPQ07075 957 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 HIC1Q14526 733 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 INTS8Q75QN2 995 aaKnown RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 SRGAP1Q7Z6B7 1085 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 SESTD1Q86VW0 696 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 NME8Q8N427 588 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 POMGNT1Q8WZA1 660 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 TARS2Q9BW92 718 aaKnown RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 NKX2-4Q9H2Z4 354 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 PCIF1Q9H4Z3 704 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 KIAA1586Q9HCI6 787 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 IL23AQ9NPF7 189 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 PRMT7Q9NVM4 692 aaPredicted RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 CXXC1Q9P0U4 656 aaPredicted RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 CHD7Q9P2D1 2997 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 GTF2IRD1Q9UHL9 959 aa14.67□□□□□ -0.06
VMP1-217ENST00000593168 TCF20Q9UGU0 1960 aaKnown RBP14.67□□□□□ -0.06
VMP1-217ENST00000593168 A0A087WZ62 844 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 INO80B-WBP1J3KQ70 363 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
VMP1-217ENST00000593168 TREHO43280 583 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 AFPP02771 609 aaKnown RBP14.66□□□□□ -0.06
VMP1-217ENST00000593168 VTNP04004 478 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 KRT13P13646 458 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 KCNA4P22459 653 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 IGFBP4P22692 258 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 NLRP11P59045 1033 aaKnown RBP14.66□□□□□ -0.06
VMP1-217ENST00000593168 MBTD1Q05BQ5 628 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 TRIM14Q14142 442 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 RAB30Q15771 203 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 NBPF20Q3BBV1 942 aa14.66□□□□□ -0.06
VMP1-217ENST00000593168 TAF2Q6P1X5 1199 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms