RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 KIFAP3Q92845 792 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 EAF2Q96CJ1 260 aaPredicted RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 TLCD1Q96CP7 247 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 DHTKD1Q96HY7 919 aaPredicted RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 CAPZA3Q96KX2 299 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TCEANC2Q96MN5 208 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 ERGIC2Q96RQ1 377 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TSPAN18Q96SJ8 248 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 LZTS2Q9BRK4 669 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 LRRC1Q9BTT6 524 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TMPRSS13Q9BYE2 586 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 PPP1R12CQ9BZL4 782 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 VRTNQ9H8Y1 702 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 RXFP1Q9HBX9 757 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 KCNMB3Q9NPA1 279 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 ARHGEF3Q9NR81 526 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPC1-213ENST00000591955 DDX25Q9UHL0 483 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 CNOT7Q9UIV1 285 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 FBXO2Q9UK22 296 aaPredicted RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 ARL2BPQ9Y2Y0 163 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 NOC2LQ9Y3T9 749 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 BCL9O00512 1426 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 ZNF609O15014 1411 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 USP6P35125 1406 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 GOLGB1Q14789 3259 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 FAM95CA0A1B0GW59 222 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 FRMD3A2A2Y4 597 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 EME2A4GXA9 379 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 TRIM75PA6NK02 468 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CHGBP05060 677 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 MYBP10242 640 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CCNB1P14635 433 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 TPP2P29144 1249 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 MARCKSP29966 332 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 LIFRP42702 1097 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 RANBP1P43487 201 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 SEC24CP53992 1094 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 HERVK_113P62684 666 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 OCRLQ01968 901 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 GOLGA8FQ08AF8 430 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 GOLGA8DPQ0D2H9 430 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 BNIP1Q12981 228 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ITGA9Q13797 1035 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ADRM1Q16186 407 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 VWA3BQ502W6 1294 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 COBLL1Q53SF7 1204 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CCDC178Q5BJE1 867 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 C1QTNF12Q5T7M4 302 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 THEMIS2Q5TEJ8 643 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 PAOXQ6QHF9 649 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 SEPT14Q6ZU15 432 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 TOM1L2Q6ZVM7 507 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 SGMS1Q86VZ5 419 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 COL23A1Q86Y22 540 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 PASD1Q8IV76 773 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ARHGAP24Q8N264 748 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 RBBP8NLQ8NC74 664 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 SMG8Q8ND04 991 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 FLCNQ8NFG4 579 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ATP8B4Q8TF62 1192 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 STK32AQ8WU08 396 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CPLX3Q8WVH0 158 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 SNRNP27Q8WVK2 155 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 NCSTNQ92542 709 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CCDC97Q96F63 343 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 LTV1Q96GA3 475 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 BORCS6Q96GS4 357 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 GBP5Q96PP8 586 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ROPN1BQ9BZX4 212 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 DCLRE1BQ9H816 532 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 NHEJ1Q9H9Q4 299 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 ROPN1Q9HAT0 212 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 EPB41L5Q9HCM4 733 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 TBCCD1Q9NVR7 557 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 ABI2Q9NYB9 513 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 PLAGL2Q9UPG8 496 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 FNDC3AQ9Y2H6 1198 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 THRAP3Q9Y2W1 955 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 REXO2Q9Y3B8 237 aaKnown RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 USP15Q9Y4E8 981 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.38□□□□□ -1.39
NPC1-213ENST00000591955 ACEP12821 1306 aa6.38□□□□□ -1.39
NPC1-213ENST00000591955 LY75O60449 1722 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 TOGARAM1Q9Y4F4 1720 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 A0A087WWV3 80 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 SMIM31A0A1B0GVY4 71 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 TTC26A0AVF1 554 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 PI4KAP2A4QPH2 592 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 RBAK-RBAKDNI3L0D1 243 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 ENC1O14682 589 aa6.37□□□□□ -1.39
NPC1-213ENST00000591955 WDR46O15213 610 aaKnown RBP6.37□□□□□ -1.39
NPC1-213ENST00000591955 RNF113AO15541 343 aaKnown RBP6.37□□□□□ -1.39
NPC1-213ENST00000591955 ZBTB43O43298 467 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms