RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 DDX11Q96FC9 970 aa8.78□□□□□ -1
VMP1-213ENST00000591877 SLC6A18Q96N87 628 aa8.78□□□□□ -1
VMP1-213ENST00000591877 FANCD2OSQ96PS1 177 aa8.78□□□□□ -1
VMP1-213ENST00000591877 TMEM47Q9BQJ4 181 aa8.78□□□□□ -1
VMP1-213ENST00000591877 GSX1Q9H4S2 264 aaPredicted RBP8.78□□□□□ -1
VMP1-213ENST00000591877 DISC1Q9NRI5 854 aa8.78□□□□□ -1
VMP1-213ENST00000591877 TCP11L1Q9NUJ3 509 aa8.78□□□□□ -1
VMP1-213ENST00000591877 TYW1Q9NV66 732 aaKnown RBP8.78□□□□□ -1
VMP1-213ENST00000591877 NRBP1Q9UHY1 535 aa8.78□□□□□ -1
VMP1-213ENST00000591877 NEDD4P46934 1319 aa8.78□□□□□ -1
VMP1-213ENST00000591877 ADCY6O43306 1168 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 BMP8BP34820 402 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 MAGEA10P43363 369 aaPredicted RBP8.77□□□□□ -1.01
VMP1-213ENST00000591877 AMPD3Q01432 767 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 FBLN7Q53RD9 439 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 AKNAD1Q5T1N1 836 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 SLC39A5Q6ZMH5 540 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 RPUSD2Q8IZ73 545 aaKnown RBP8.77□□□□□ -1.01
VMP1-213ENST00000591877 ARRDC4Q8NCT1 418 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 CHST13Q8NET6 341 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 CHURC1Q8WUH1 139 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 TOMM22Q9NS69 142 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 HOMER2Q9NSB8 354 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 ASTN1O14525 1302 aa8.77□□□□□ -1.01
VMP1-213ENST00000591877 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 UBOX5O94941 541 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 PGK1P00558 417 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 CST3P01034 146 aaPredicted RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 SNHG28P0DPA3 235 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 PDHBP11177 359 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 TOP1P11387 765 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 ADH5P11766 374 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 POLR2BP30876 1174 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 SLC16A2P36021 539 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 SNX17Q15036 470 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 MUM1L1Q5H9M0 696 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 TTC22Q5TAA0 569 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 CCDC174Q6PII3 467 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 BTNL9Q6UXG8 535 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 MFSD6Q6ZSS7 791 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 TMEM192Q8IY95 271 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 ANKRD35Q8N283 1001 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 MSL3Q8N5Y2 521 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 FAM133AQ8N9E0 248 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 DCAF4Q8WV16 495 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 NINJ1Q92982 152 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 FERMT2Q96AC1 680 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 MFSD3Q96ES6 412 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 DSCC1Q9BVC3 393 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 KATNBL1Q9H079 304 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 RANBP17Q9H2T7 1088 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 A1CFQ9NQ94 594 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 XPNPEP3Q9NQH7 507 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 DIAPH3Q9NSV4 1193 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 RNF146Q9NTX7 359 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 FBXO40Q9UH90 709 aa8.76□□□□□ -1.01
VMP1-213ENST00000591877 ISY1Q9ULR0 285 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 CTDP1Q9Y5B0 961 aaPredicted RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 DDX49Q9Y6V7 483 aaKnown RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 FRMPD2Q68DX3 1309 aaPredicted RBP8.76□□□□□ -1.01
VMP1-213ENST00000591877 KBTBD13C9JR72 458 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 ZNF213O14771 459 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 CLEC3AO75596 197 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 RARBP10826 455 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 PCP11498 1178 aaKnown RBP8.75□□□□□ -1.01
VMP1-213ENST00000591877 ALAS1P13196 640 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 AKR1A1P14550 325 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 RTP1P59025 263 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 IKQ13123 557 aaPredicted RBP8.75□□□□□ -1.01
VMP1-213ENST00000591877 ACVR2BQ13705 512 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 SLBPQ14493 270 aaKnown RBP eCLIP8.75□□□□□ -1.01
VMP1-213ENST00000591877 CCDC96Q2M329 555 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 TM4SF20Q53R12 229 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 CCSAPQ6IQ19 270 aaPredicted RBP8.75□□□□□ -1.01
VMP1-213ENST00000591877 ARMCX2Q7L311 632 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 PPFIBP1Q86W92 1011 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 TTC14Q96N46 770 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 KIF2CQ99661 725 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 ACAD9Q9H845 621 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 ZHX1Q9UKY1 873 aaPredicted RBP8.75□□□□□ -1.01
VMP1-213ENST00000591877 CNPY2Q9Y2B0 182 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 MYH6P13533 1939 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 SYNRGQ9UMZ2 1314 aa8.75□□□□□ -1.01
VMP1-213ENST00000591877 MYADML2A6NDP7 307 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 FAM86C2PA6NEL3 165 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 HIP1O00291 1037 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 TIAF1O95411 115 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 ICAM1P05362 532 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 ZNF543Q08ER8 600 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 HSP90AA2PQ14568 343 aaPredicted RBP8.74□□□□□ -1.01
VMP1-213ENST00000591877 NFKBIBQ15653 356 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 FNDC3BQ53EP0 1204 aaKnown RBP8.74□□□□□ -1.01
VMP1-213ENST00000591877 SYDE2Q5VT97 1194 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 KLHDC9Q8NEP7 349 aa8.74□□□□□ -1.01
VMP1-213ENST00000591877 FLCNQ8NFG4 579 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms