RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RSAD1Q9HA92 442 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 XPNPEP1Q9NQW7 623 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 DZANK1Q9NVP4 752 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 INPP5FQ9Y2H2 1132 aa11.59□□□□□ -0.55
VPS4B-207ENST00000591519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
VPS4B-207ENST00000591519 BTBD18B2RXH4 712 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 DGAT1O75907 488 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 ARL2P36404 184 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 NEK4P51957 841 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 KIAA1841Q6NSI8 718 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 TPH2Q8IWU9 490 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 UBALD2Q8IYN6 164 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 NECAB1Q8N987 351 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 SMG8Q8ND04 991 aaKnown RBP11.58□□□□□ -0.56
VPS4B-207ENST00000591519 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
VPS4B-207ENST00000591519 AUTS2Q8WXX7 1259 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 EIF2AK1Q9BQI3 630 aaKnown RBP11.58□□□□□ -0.56
VPS4B-207ENST00000591519 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
VPS4B-207ENST00000591519 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 FAN1Q9Y2M0 1017 aa11.58□□□□□ -0.56
VPS4B-207ENST00000591519 WDFY4Q6ZS81 3184 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 NRP1O14786 923 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 TSPAN1O60635 241 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 ERLIN2O94905 339 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 C1RP00736 705 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 ITGA4P13612 1032 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 EPCAMP16422 314 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 RARRES1P49788 294 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 MRE11P49959 708 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 CYP4A11Q02928 519 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 DSC1Q08554 894 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 NCBP1Q09161 790 aaKnown RBP11.57□□□□□ -0.56
VPS4B-207ENST00000591519 TFDP1Q14186 410 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 CALCRLQ16602 461 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 AMHR2Q16671 573 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
VPS4B-207ENST00000591519 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 RNF168Q8IYW5 571 aaPredicted RBP11.57□□□□□ -0.56
VPS4B-207ENST00000591519 C12orf76Q8N812 135 aaPredicted RBP11.57□□□□□ -0.56
VPS4B-207ENST00000591519 PRSS33Q8NF86 280 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 KLHL5Q96PQ7 755 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
VPS4B-207ENST00000591519 EMILIN2Q9BXX0 1053 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 CDH22Q9UJ99 828 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 SORCS3Q9UPU3 1222 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 ZDBF2Q9HCK1 2354 aa11.57□□□□□ -0.56
VPS4B-207ENST00000591519 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 PAPLNO95428 1278 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 LARGE1O95461 756 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 SOD2P04179 222 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 CNPP09543 421 aaKnown RBP11.56□□□□□ -0.56
VPS4B-207ENST00000591519 AVPR2P30518 371 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 CLCN4P51793 760 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 RARS2Q5T160 578 aaKnown RBP11.56□□□□□ -0.56
VPS4B-207ENST00000591519 KIAA0319Q5VV43 1072 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 KANK3Q6NY19 840 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 NOTUMQ6P988 496 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 CABP7Q86V35 215 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 DIS3L2Q8IYB7 885 aaKnown RBP11.56□□□□□ -0.56
VPS4B-207ENST00000591519 GPR65Q8IYL9 337 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 KREMEN2Q8NCW0 462 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 EIF2AQ9BY44 585 aaKnown RBP11.56□□□□□ -0.56
VPS4B-207ENST00000591519 RHOBTB2Q9BYZ6 727 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 GBP3Q9H0R5 595 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 MRPL17Q9NRX2 175 aaKnown RBP11.56□□□□□ -0.56
VPS4B-207ENST00000591519 MIOSQ9NXC5 875 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 GIT1Q9Y2X7 761 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 IPPQ9Y573 584 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 ARID2Q68CP9 1835 aa11.56□□□□□ -0.56
VPS4B-207ENST00000591519 A0A1B0GUA9 196 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 ARL5CA6NH57 179 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 INO80B-WBP1J3KQ70 363 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 WNT7AO00755 349 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 NEMFO60524 1076 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 POMCP01189 267 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 WEE2P0C1S8 567 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 ARF4P18085 180 aaPredicted RBP11.55□□□□□ -0.56
VPS4B-207ENST00000591519 GLRA2P23416 452 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 KLRC2P26717 231 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 CA8P35219 290 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 TXKP42681 527 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 MBTD1Q05BQ5 628 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 TCF15Q12870 199 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 CAPSQ13938 189 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 CYP26C1Q6V0L0 522 aa11.55□□□□□ -0.56
VPS4B-207ENST00000591519 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms