RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 HAUS6Q7Z4H7 955 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 GSTCDQ8NEC7 633 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 RABGGTAQ92696 567 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 HPS3Q969F9 1004 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 MRPL38Q96DV4 380 aaKnown RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 C11orf84Q9BUA3 381 aaPredicted RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 FGFBP2Q9BYJ0 223 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 HAPLN2Q9GZV7 340 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 CDT1Q9H211 546 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 PARVGQ9HBI0 331 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 PTPRHQ9HD43 1115 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 TTC28Q96AY4 2481 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 TDRD15B5MCY1 1934 aaKnown RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 TISP43B9A030 160 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 MEFVO15553 781 aaPredicted RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 ZC3H11AO75152 810 aaKnown RBP eCLIP12.66□□□□□ -0.38
VMP1-211ENST00000591315 TBCAO75347 108 aaKnown RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 RECQL4O94761 1208 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 LAG3P18627 525 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
VMP1-211ENST00000591315 SLC11A1P49279 550 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 BCAR1P56945 870 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 ERVFC1P60507 584 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 OSTNP61366 133 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 KRT85P78386 507 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 ADGRD2Q7Z7M1 963 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 SLC39A11Q8N1S5 342 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 TMEM130Q8N3G9 435 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 ZNF558Q96NG5 402 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 MRPL4Q9BYD3 311 aaKnown RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 C17orf75Q9HAS0 396 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
VMP1-211ENST00000591315 PCDHB12Q9Y5F1 795 aa12.66□□□□□ -0.38
VMP1-211ENST00000591315 VCANP13611 3396 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 K7ENM7 598 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 TRAK2O60296 914 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 GALTP07902 379 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 IDEP14735 1019 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 PROZP22891 400 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 IGFBP6P24592 240 aaPredicted RBP12.65□□□□□ -0.38
VMP1-211ENST00000591315 CASP5P51878 434 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 SMTNP53814 917 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
VMP1-211ENST00000591315 KCNA1Q09470 495 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 SKIV2LQ15477 1246 aaKnown RBP12.65□□□□□ -0.38
VMP1-211ENST00000591315 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 GLIS3Q8NEA6 775 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 P2RX5Q93086 422 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 KBTBD4Q9NVX7 518 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 LARSQ9P2J5 1176 aaKnown RBP12.65□□□□□ -0.38
VMP1-211ENST00000591315 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 RWDD3Q9Y3V2 267 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
VMP1-211ENST00000591315 ANKRD63C9JTQ0 380 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 PTGESO14684 152 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 INPPL1O15357 1258 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 MYBP10242 640 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 PFKFB1P16118 471 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 AFMP43652 599 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 TFF2Q03403 129 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 STRN3Q13033 797 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 ZNF568Q3ZCX4 644 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 ZBTB41Q5SVQ8 909 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 FAM178BQ8IXR5 827 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 IQUBQ8NA54 791 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 PAAF1Q9BRP4 392 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 TCHPQ9BT92 498 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 MRPL9Q9BYD2 267 aaKnown RBP12.64□□□□□ -0.39
VMP1-211ENST00000591315 BLZF1Q9H2G9 400 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 AAASQ9NRG9 546 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 SPG21Q9NZD8 308 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 LMCD1Q9NZU5 365 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 KCNH3Q9ULD8 1083 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 PRG3Q9Y2Y8 225 aaPredicted RBP12.64□□□□□ -0.39
VMP1-211ENST00000591315 C5orf42Q9H799 3197 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 CITO14578 2027 aa12.64□□□□□ -0.39
VMP1-211ENST00000591315 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms