RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 FBXL18Q96ME1 805 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 TMEM175Q9BSA9 504 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 VN1R3Q9BXE9 311 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 CDH22Q9UJ99 828 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 NR2E1Q9Y466 385 aa19.87■□□□□ 0.77
VAT1-208ENST00000590924 MYH15Q9Y2K3 1946 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 INPPL1O15357 1258 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 MTHFRP42898 656 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 RARRES1P49788 294 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 SIGLEC14Q08ET2 396 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 PTPN14Q15678 1187 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 PTPN21Q16825 1174 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 KRT79Q5XKE5 535 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 NOTUMQ6P988 496 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 KRI1Q8N9T8 703 aaKnown RBP19.86■□□□□ 0.77
VAT1-208ENST00000590924 TMEM87AQ8NBN3 555 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 SMG8Q8ND04 991 aaKnown RBP19.86■□□□□ 0.77
VAT1-208ENST00000590924 SLC22A17Q8WUG5 538 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 FAM193BQ96PV7 902 aaPredicted RBP19.86■□□□□ 0.77
VAT1-208ENST00000590924 NFKBIZQ9BYH8 718 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 SCAND2PQ9GZW5 306 aaPredicted RBP19.86■□□□□ 0.77
VAT1-208ENST00000590924 POMKQ9H5K3 350 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 UBN1Q9NPG3 1134 aa19.86■□□□□ 0.77
VAT1-208ENST00000590924 FBXO2Q9UK22 296 aaPredicted RBP19.86■□□□□ 0.77
VAT1-208ENST00000590924 SPATA31C1P0DKV0 1188 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 MARCKSP29966 332 aaPredicted RBP19.85■□□□□ 0.77
VAT1-208ENST00000590924 ARL2P36404 184 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 CAPSQ13938 189 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 FOXD4L6Q3SYB3 417 aaPredicted RBP19.85■□□□□ 0.77
VAT1-208ENST00000590924 FOXD4L3Q6VB84 417 aaPredicted RBP19.85■□□□□ 0.77
VAT1-208ENST00000590924 PPFIBP1Q86W92 1011 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 PBXIP1Q96AQ6 731 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 RIPOR3Q96MK2 946 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 CCDC43Q96MW1 224 aaKnown RBP19.85■□□□□ 0.77
VAT1-208ENST00000590924 IPPQ9Y573 584 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 DOCK8Q8NF50 2099 aa19.85■□□□□ 0.77
VAT1-208ENST00000590924 INO80B-WBP1J3KQ70 363 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 POMCP01189 267 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 ALDH2P05091 517 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 ITGA4P13612 1032 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 EPCAMP16422 314 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 NHLH1Q02575 133 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 MBTD1Q05BQ5 628 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 NCBP1Q09161 790 aaKnown RBP19.84■□□□□ 0.77
VAT1-208ENST00000590924 AMHR2Q16671 573 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 RARS2Q5T160 578 aaKnown RBP19.84■□□□□ 0.77
VAT1-208ENST00000590924 KIAA1841Q6NSI8 718 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 CATSPER3Q86XQ3 398 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 ASAP3Q8TDY4 903 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 ASIC4Q96FT7 647 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 EIF2AQ9BY44 585 aaKnown RBP19.84■□□□□ 0.77
VAT1-208ENST00000590924 CSRNP2Q9H175 543 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 FAN1Q9Y2M0 1017 aa19.84■□□□□ 0.77
VAT1-208ENST00000590924 NRP1O14786 923 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 CUTAO60888 179 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 GLRA2P23416 452 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 SP100P23497 879 aaPredicted RBP19.83■□□□□ 0.77
VAT1-208ENST00000590924 CCT6AP40227 531 aaKnown RBP19.83■□□□□ 0.77
VAT1-208ENST00000590924 HYIQ5T013 277 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 SUGP1Q8IWZ8 645 aaKnown RBP19.83■□□□□ 0.77
VAT1-208ENST00000590924 FBXL6Q8N531 539 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 PIGOQ8TEQ8 1089 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 CPB2Q96IY4 423 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 NACC1Q96RE7 527 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 CCSER1Q9C0I3 900 aa19.83■□□□□ 0.77
VAT1-208ENST00000590924 ARL5CA6NH57 179 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 C2CD4DB7Z1M9 353 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 MED24O75448 989 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 ARF4P18085 180 aaPredicted RBP19.82■□□□□ 0.76
VAT1-208ENST00000590924 MLH1P40692 756 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 UBA7P41226 1012 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 DSC1Q08554 894 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 CABP7Q86V35 215 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 COLGALT2Q8IYK4 626 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 C12orf76Q8N812 135 aaPredicted RBP19.82■□□□□ 0.76
VAT1-208ENST00000590924 SNX29Q8TEQ0 813 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 LEO1Q8WVC0 666 aaPredicted RBP19.82■□□□□ 0.76
VAT1-208ENST00000590924 SPATA32Q96LK8 384 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 GAD1Q99259 594 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 MMTAG2Q9BU76 263 aaKnown RBP19.82■□□□□ 0.76
VAT1-208ENST00000590924 EMILIN2Q9BXX0 1053 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 NT5C3AQ9H0P0 336 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 MARCH5Q9NX47 278 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 HES2Q9Y543 173 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 MYH11P35749 1972 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 ZMYM2Q9UBW7 1377 aa19.82■□□□□ 0.76
VAT1-208ENST00000590924 USO1O60763 962 aaKnown RBP19.81■□□□□ 0.76
VAT1-208ENST00000590924 LILRB3O75022 631 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 SOD2P04179 222 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 WEE2P0C1S8 567 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 ATAT1Q5SQI0 421 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 ZBTB33Q86T24 672 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 HACE1Q8IYU2 909 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 TRIM6Q9C030 488 aaPredicted RBP19.81■□□□□ 0.76
VAT1-208ENST00000590924 POLR3FQ9H1D9 316 aaPredicted RBP19.81■□□□□ 0.76
VAT1-208ENST00000590924 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 SFXN1Q9H9B4 322 aa19.81■□□□□ 0.76
VAT1-208ENST00000590924 MRPL17Q9NRX2 175 aaKnown RBP19.81■□□□□ 0.76
VAT1-208ENST00000590924 DBR1Q9UK59 544 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms