RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 COL4A3BPQ9Y5P4 624 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
CXXC1-214ENST00000590901 ZNF862O60290 1169 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 HIP1RO75146 1068 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 MYO1EQ12965 1108 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 RIPK1Q13546 671 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 TMEM63BQ5T3F8 832 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 TMC3Q7Z5M5 1100 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 NSMCE1Q8WV22 266 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 TLCD1Q96CP7 247 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.74■□□□□ 0.27
CXXC1-214ENST00000590901 PACSIN1Q9BY11 444 aa16.74■□□□□ 0.27
CXXC1-214ENST00000590901 A0A087X0T9 212 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
CXXC1-214ENST00000590901 NOL4O94818 638 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 FAM228BP0C875 321 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 RARRES1P49788 294 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 MOGSQ13724 837 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
CXXC1-214ENST00000590901 PADI6Q6TGC4 694 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 LSM14BQ9BX40 385 aaKnown RBP16.73■□□□□ 0.27
CXXC1-214ENST00000590901 SLC12A4Q9UP95 1085 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 CSADQ9Y600 493 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 F8VZ95 297 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 TBCAO75347 108 aaKnown RBP16.73■□□□□ 0.27
CXXC1-214ENST00000590901 LBX2Q6XYB7 198 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 MDM1Q8TC05 714 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 CCHCR1Q8TD31 782 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 TSG101Q99816 390 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 C15orf41Q9Y2V0 281 aa16.73■□□□□ 0.27
CXXC1-214ENST00000590901 CFAP73A6NFT4 308 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 CCDC188H7C350 402 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 DAPK3O43293 454 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 FAM13AO94988 1023 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ACTN1P12814 892 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 KCNA2P16389 499 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 GRIK3Q13003 919 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ITIH4Q14624 930 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 GPR162Q16538 588 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 C11orf91Q3C1V1 193 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ANO5Q75V66 913 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 TCP11Q8WWU5 503 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 KIFC3Q9BVG8 833 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 DDX47Q9H0S4 455 aaKnown RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ACAD9Q9H845 621 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 HOXC10Q9NYD6 342 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 BTNL10A8MVZ5 291 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 CNMDO75829 334 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 PGK2P07205 417 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 P4HBP07237 508 aaKnown RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 DHX9Q08211 1270 aaKnown RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ZNF317Q96PQ6 595 aaPredicted RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 USP20Q9Y2K6 914 aa16.72■□□□□ 0.27
CXXC1-214ENST00000590901 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
CXXC1-214ENST00000590901 ARHGEF35A5YM69 484 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 ASAP2O43150 1006 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 LRRN2O75325 713 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 CLTAP09496 248 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
CXXC1-214ENST00000590901 CCNHP51946 323 aaPredicted RBP16.71■□□□□ 0.27
CXXC1-214ENST00000590901 EIF3BP55884 814 aaKnown RBP16.71■□□□□ 0.27
CXXC1-214ENST00000590901 KLHL30Q0D2K2 578 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 ZNF720Q7Z2F6 126 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.71■□□□□ 0.273e-7■■■□□ 15.8
CXXC1-214ENST00000590901 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
CXXC1-214ENST00000590901 FAM170AA1A519 330 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 ATP2A1O14983 1001 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.26
CXXC1-214ENST00000590901 NIPA1Q7RTP0 329 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 PNMA8AQ86V59 439 aaPredicted RBP16.71■□□□□ 0.26
CXXC1-214ENST00000590901 NSUN6Q8TEA1 469 aaKnown RBP16.71■□□□□ 0.26
CXXC1-214ENST00000590901 OPTNQ96CV9 577 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.26
CXXC1-214ENST00000590901 SLITRK6Q9H5Y7 841 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 PARVGQ9HBI0 331 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 MCM3APO60318 1980 aa16.71■□□□□ 0.26
CXXC1-214ENST00000590901 SOWAHBA6NEL2 793 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 KRIT1O00522 736 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 ZNF131P52739 623 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 ARID5AQ03989 594 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 SLMAPQ14BN4 828 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 ASIC2Q16515 512 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 IFI16Q16666 785 aaKnown RBP16.7■□□□□ 0.26
CXXC1-214ENST00000590901 DPY19L2Q6NUT2 758 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 HOOK3Q86VS8 718 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 NCAPG2Q86XI2 1143 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 ANKRD35Q8N283 1001 aa16.7■□□□□ 0.26
CXXC1-214ENST00000590901 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms