RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 ENTPD7Q9NQZ7 604 aa15.43■□□□□ 0.06
SCAMP4-212ENST00000590266 ANKFY1Q9P2R3 1169 aa15.43■□□□□ 0.06
SCAMP4-212ENST00000590266 MORC2Q9Y6X9 1032 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-212ENST00000590266 PRUNE2Q8WUY3 3088 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 B4GALT3O60512 393 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 DDHD2O94830 711 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 SLC11A1P49279 550 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 OSTNP61366 133 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 CAMK1Q14012 370 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 DCAF4L1Q3SXM0 396 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 PLPP4Q5VZY2 271 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 ATL3Q6DD88 541 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 SHC4Q6S5L8 630 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 APBB1IPQ7Z5R6 666 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 RBM23Q86U06 439 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 SLC39A11Q8N1S5 342 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 TMEM161BQ8NDZ6 487 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 RSPH1Q8WYR4 309 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 MRPS27Q92552 414 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 DDX12PQ92771 950 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 STAMQ92783 540 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 HLA-CQ95604 372 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 DHX58Q96C10 678 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 TMEM169Q96HH4 297 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 UHRF1Q96T88 793 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 ACO2Q99798 780 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 TLR9Q9NR96 1032 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 KANSL3Q9P2N6 904 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 PCDHA7Q9UN72 937 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 COG5Q9UP83 839 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 GIT1Q9Y2X7 761 aa15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 PRG3Q9Y2Y8 225 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-212ENST00000590266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 MYMKA6NI61 221 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 TRAK2O60296 914 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 RECQL4O94761 1208 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 MAPTP10636 758 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 IDEP14735 1019 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 OR1G1P47890 313 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 KRT85P78386 507 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 TMC7Q7Z402 723 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 HAUS6Q7Z4H7 955 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 ADGRD2Q7Z7M1 963 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 TMEM173Q86WV6 379 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 FAM178BQ8IXR5 827 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 SPATA32Q96LK8 384 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 TCF25Q9BQ70 676 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 NTPCRQ9BSD7 190 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 MIOSQ9NXC5 875 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 TNFSF13BQ9Y275 285 aa15.41■□□□□ 0.06
SCAMP4-212ENST00000590266 H0YCG3 227 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 GALTP07902 379 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 NMT1P30419 496 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 NRIP1P48552 1158 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 ERVFC1P60507 584 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 UBE3AQ05086 875 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 SFR1Q86XK3 245 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 CEP120Q8N960 986 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 BCL7CQ8WUZ0 217 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 PPP2R3CQ969Q6 453 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 ZBTB45Q96K62 511 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 CDT1Q9H211 546 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 CLDND1Q9NY35 253 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 TBC1D7Q9P0N9 293 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 FAN1Q9Y2M0 1017 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 VCANP13611 3396 aa15.4■□□□□ 0.06
SCAMP4-212ENST00000590266 NRP1O14786 923 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 PER2O15055 1255 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 POLR2DO15514 142 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 NR1I2O75469 434 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 ALDH2P05091 517 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 KCNA5P22460 613 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 LIG4P49917 911 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 ZNF131P52739 623 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 HYAL1Q12794 435 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 GLRA4Q5JXX5 417 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 MPZL3Q6UWV2 235 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 LEO1Q8WVC0 666 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 IGSF21Q96ID5 467 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 CCDC94Q9BW85 323 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 CACNG4Q9UBN1 327 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 RCOR1Q9UKL0 485 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 TBX20Q9UMR3 447 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 LZTS1Q9Y250 596 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 TTC28Q96AY4 2481 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 TRANK1O15050 2925 aa15.39■□□□□ 0.05
SCAMP4-212ENST00000590266 HNRNPDLO14979 420 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-212ENST00000590266 LINC01565O15544 149 aa15.38■□□□□ 0.05
SCAMP4-212ENST00000590266 KCNQ1P51787 676 aa15.38■□□□□ 0.05
SCAMP4-212ENST00000590266 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms