RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 OFD1O75665 1012 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 TOM1L1O75674 476 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 MYL1P05976 194 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 CASP1P29466 404 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 CTNNB1P35222 781 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 MATR3P43243 847 aaKnown RBP eCLIP23.35■■□□□ 1.33
ATG4D-212ENST00000590096 LIG4P49917 911 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 ZC2HC1CQ53FD0 456 aaPredicted RBP23.35■■□□□ 1.33
ATG4D-212ENST00000590096 NOMO2Q5JPE7 1267 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 KRBA2Q6ZNG9 492 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 MAP4K3Q8IVH8 894 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 FBXO22Q8NEZ5 403 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 RNF39Q9H2S5 420 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 PRDM12Q9H4Q4 367 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 TYW1Q9NV66 732 aaKnown RBP23.35■■□□□ 1.33
ATG4D-212ENST00000590096 ANKFY1Q9P2R3 1169 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 GIT1Q9Y2X7 761 aa23.35■■□□□ 1.33
ATG4D-212ENST00000590096 PVALEFA0A1B0GWK0 134 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 GTPBP6O43824 516 aaPredicted RBP23.34■■□□□ 1.33
ATG4D-212ENST00000590096 FAM160A1Q05DH4 1040 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 EPC2Q52LR7 807 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 KANK3Q6NY19 840 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 STXBP4Q6ZWJ1 553 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 ZBTB33Q86T24 672 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 TMEM87AQ8NBN3 555 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 CDT1Q9H211 546 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 PTPRHQ9HD43 1115 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 AAASQ9NRG9 546 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 EXOC7Q9UPT5 735 aa23.34■■□□□ 1.33
ATG4D-212ENST00000590096 KIAA1671Q9BY89 1806 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 CHD9Q3L8U1 2897 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 CLDN3O15551 220 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 MCF2P10911 925 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 HARSP12081 509 aaKnown RBP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 PROZP22891 400 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 AKAP5P24588 427 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 BMPR1AP36894 532 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 RNASELQ05823 741 aaKnown RBP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 NOLC1Q14978 699 aaKnown RBP eCLIP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 FAM26FQ5R3K3 315 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 FMR1NBQ8N0W7 255 aaPredicted RBP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 ACCSQ96QU6 501 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 GAS2L1Q99501 681 aaPredicted RBP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 CDX2Q99626 313 aaPredicted RBP23.33■■□□□ 1.33
ATG4D-212ENST00000590096 SNTG2Q9NY99 539 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 KANSL3Q9P2N6 904 aa23.33■■□□□ 1.33
ATG4D-212ENST00000590096 ZMYM2Q9UBW7 1377 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 PPP1R37O75864 691 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 PIGRP01833 764 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 RB1P06400 928 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 MYBP10242 640 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 LAG3P18627 525 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 MLH1P40692 756 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
ATG4D-212ENST00000590096 ZBTB45Q96K62 511 aaPredicted RBP23.32■■□□□ 1.32
ATG4D-212ENST00000590096 GUCD1Q96NT3 240 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 GAD1Q99259 594 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 CCDC94Q9BW85 323 aaPredicted RBP23.32■■□□□ 1.32
ATG4D-212ENST00000590096 STRA6Q9BX79 667 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 PLVAPQ9BX97 442 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 CWH43Q9H720 699 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 TBC1D13Q9NVG8 400 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 GDAQ9Y2T3 454 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 PCDHB12Q9Y5F1 795 aa23.32■■□□□ 1.32
ATG4D-212ENST00000590096 ARL5CA6NH57 179 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 EPOPA6NHQ4 379 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 GADD45BO75293 160 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-212ENST00000590096 RECQL4O94761 1208 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 LINC00271P0C7V0 271 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 LRRC55Q6ZSA7 311 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 MYLIPQ8WY64 445 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 CCDC47Q96A33 483 aaKnown RBP23.31■■□□□ 1.32
ATG4D-212ENST00000590096 FAM193BQ96PV7 902 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-212ENST00000590096 RPS6KC1Q96S38 1066 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 C11orf84Q9BUA3 381 aaPredicted RBP23.31■■□□□ 1.32
ATG4D-212ENST00000590096 EXOC1Q9NV70 894 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 KLK14Q9P0G3 267 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 HCSTQ9UBK5 93 aa23.31■■□□□ 1.32
ATG4D-212ENST00000590096 C5orf67F2Z3F1 127 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 ABLIM1O14639 778 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 INPPL1O15357 1258 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 POMCP01189 267 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 GRM5P41594 1212 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 CASP5P51878 434 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 YARSP54577 528 aaKnown RBP23.3■■□□□ 1.32
ATG4D-212ENST00000590096 MCL1Q07820 350 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 SNW1Q13573 536 aaKnown RBP23.3■■□□□ 1.32
ATG4D-212ENST00000590096 THNSL1Q8IYQ7 743 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 SYCP3Q8IZU3 236 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 COLGALT1Q8NBJ5 622 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 ENGASEQ8NFI3 743 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 GDPD5Q8WTR4 605 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 HPS3Q969F9 1004 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 FGFBP2Q9BYJ0 223 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 GBP3Q9H0R5 595 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 TMEM206Q9H813 350 aa23.3■■□□□ 1.32
ATG4D-212ENST00000590096 COL4A4P53420 1690 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-212ENST00000590096 RFXAPO00287 272 aa23.29■■□□□ 1.32
ATG4D-212ENST00000590096 ZC3H11AO75152 810 aaKnown RBP eCLIP23.29■■□□□ 1.32
ATG4D-212ENST00000590096 PRPF6O94906 941 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms