RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 BMP2KQ9NSY1 1161 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 HCFC1R1Q9NWW0 138 aa14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 BRPF3Q9ULD4 1205 aa14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 NDRG2Q9UN36 371 aaKnown RBP14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 ZFP37Q9Y6Q3 630 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 CNTNAP2Q9UHC6 1331 aa14.3□□□□□ -0.12
NEDD4L-227ENST00000590020 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 EDIL3O43854 480 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 GAS7O60861 476 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 SRGAP2CP0DJJ0 459 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 PFKPQ01813 784 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 DSC1Q08554 894 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 IPPQ9Y573 584 aa14.29□□□□□ -0.12
NEDD4L-227ENST00000590020 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 SLC27A2O14975 620 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 NCAM2O15394 837 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 CDC27P30260 824 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 RPS9P46781 194 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 JAK3P52333 1124 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 USP41Q3LFD5 358 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 XKR3Q5GH77 459 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 RTP2Q5QGT7 225 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 PPM1LQ5SGD2 360 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 LRCH2Q5VUJ6 765 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 RSPO2Q6UXX9 243 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 ZNF852Q6ZMS4 543 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 MIER3Q7Z3K6 550 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 SGMS1Q86VZ5 419 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 ZNF579Q8NAF0 562 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 HASPINQ8TF76 798 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 CPB2Q96IY4 423 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 MBOAT7Q96N66 472 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 TEKT3Q9BXF9 490 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 FNIP2Q9P278 1114 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 FBXW11Q9UKB1 542 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
NEDD4L-227ENST00000590020 C8AP07357 584 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 RETP07949 1114 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 PMLP29590 882 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 SFNP31947 248 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 CIITAP33076 1130 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 ADCY1Q08828 1119 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 ANO5Q75V66 913 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 TEX2Q8IWB9 1127 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 NPAS3Q8IXF0 933 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 SLC5A5Q92911 643 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 TMEM143Q96AN5 459 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 MCRS1Q96EZ8 462 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 CLSTN3Q9BQT9 956 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 FAM126AQ9BYI3 521 aaPredicted RBP14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 ATRXP46100 2492 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 NOTCH4Q99466 2003 aa14.27□□□□□ -0.13
NEDD4L-227ENST00000590020 RALGAPA1Q6GYQ0 2036 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 GOLGA8BA8MQT2 603 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 ADAM12O43184 909 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 ZBTB43O43298 467 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 NR1I2O75469 434 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 NPEPPSP55786 919 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 SIM2Q14190 667 aaPredicted RBP14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 CSRP2Q16527 193 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 LIN9Q5TKA1 542 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 CEP57Q86XR8 500 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 CELF5Q8N6W0 485 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 PRPF31Q8WWY3 499 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 NELL2Q99435 816 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 PAAF1Q9BRP4 392 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 ZMYND12Q9H0C1 365 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 C6orf50Q9HD87 102 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 DNMT3BQ9UBC3 853 aaKnown RBP14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
NEDD4L-227ENST00000590020 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 HRO43593 1189 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 TADA2AO75478 443 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 HNRNPA1P09651 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 AKAP5P24588 427 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 HOXC13P31276 330 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 FNTBP49356 437 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 NRLP54845 237 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 SATB1Q01826 763 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 GRM2Q14416 872 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 CCDC6Q16204 474 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms