RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 TISP43B9A030 160 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 PIGRP01833 764 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 STK4Q13043 487 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 PSMD2Q13200 908 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 KCNN1Q92952 543 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 PGBD4Q96DM1 585 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 ZBTB45Q96K62 511 aaPredicted RBP24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 TRAIPQ9BWF2 469 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 STRA6Q9BX79 667 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 MTMR10Q9NXD2 777 aa24.57■■□□□ 1.52
R3HDM4-205ENST00000589445 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 CLDN3O15551 220 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 ITGA4P13612 1032 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 LRIT3Q3SXY7 679 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 EPM2AIP1Q7L775 607 aaPredicted RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 ELOA2Q8IYF1 753 aaPredicted RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 SMYD4Q8IYR2 804 aaPredicted RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 SMG8Q8ND04 991 aaKnown RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 SCFD1Q8WVM8 642 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 GSDMAQ96QA5 445 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 ELAC1Q9H777 363 aaKnown RBP24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 TMEM206Q9H813 350 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 INPP5FQ9Y2H2 1132 aa24.56■■□□□ 1.52
R3HDM4-205ENST00000589445 UNC80Q8N2C7 3258 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 MEIS3P2A8K0S8 358 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 ANKRD63C9JTQ0 380 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 BIN1O00499 593 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 HOXA2O43364 376 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 MCF2P10911 925 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 OSTNP61366 133 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 ISM2Q6H9L7 571 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 SLC39A4Q6P5W5 647 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 ZNF598Q86UK7 904 aaKnown RBP24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 HELQQ8TDG4 1101 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 MSTO1Q9BUK6 570 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 PARP2Q9UGN5 583 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 MAN1B1Q9UKM7 699 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 MAPK8IP1Q9UQF2 711 aa24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 PDCD11Q14690 1871 aaKnown RBP24.55■■□□□ 1.52
R3HDM4-205ENST00000589445 TBKBP1A7MCY6 615 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 MYOGP15173 224 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 PROZP22891 400 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 AKAP5P24588 427 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 PBX2P40425 430 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 FAM189BP81408 668 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 RAB30Q15771 203 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 CLLU1OSQ5K130 101 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 GLB1LQ6UWU2 654 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 THNSL1Q8IYQ7 743 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 CEP120Q8N960 986 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 NOC3LQ8WTT2 800 aaKnown RBP24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 POMGNT1Q8WZA1 660 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 RSAD1Q9HA92 442 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 PTPRHQ9HD43 1115 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 MSRAQ9UJ68 235 aa24.54■■□□□ 1.52
R3HDM4-205ENST00000589445 TRIP11Q15643 1979 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 ABLIM1O14639 778 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 ZNF623O75123 536 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 DGKIO75912 1065 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 EOMESO95936 686 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 MLH1P40692 756 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 SEZ6Q53EL9 994 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 ARMCX5Q6P1M9 558 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 ZNF507Q8TCN5 953 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 RAD9AQ99638 391 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 CCDC94Q9BW85 323 aaPredicted RBP24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 PBX4Q9BYU1 374 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 GBP3Q9H0R5 595 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 SNTG2Q9NY99 539 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 INSL6Q9Y581 213 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 PCDHA11Q9Y5I1 949 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 ANK1P16157 1881 aa24.53■■□□□ 1.52
R3HDM4-205ENST00000589445 LCHNA4D1U4 455 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 RECQL4O94761 1208 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 KIF20AO95235 890 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 PTMSP20962 102 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 MCL1Q07820 350 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 BTG3Q14201 252 aaPredicted RBP24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 BMT2Q1RMZ1 405 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 ZNF658Q5TYW1 1059 aaPredicted RBP24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 HS2ST1Q7LGA3 356 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 MRPL10Q7Z7H8 261 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 SPATA20Q8TB22 786 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 HAPLN2Q9GZV7 340 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 RNF39Q9H2S5 420 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 RNF19AQ9NV58 838 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 KLK14Q9P0G3 267 aa24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 YBX2Q9Y2T7 364 aaKnown RBP24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 COL4A4P53420 1690 aaPredicted RBP24.52■■□□□ 1.52
R3HDM4-205ENST00000589445 CA3P07451 260 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 DNAJB2P25686 324 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 HOXD13P35453 343 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 GRM5P41594 1212 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 HTRA4P83105 476 aaPredicted RBP24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 SMAD3P84022 425 aaKnown RBP24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 SLFN12LQ6IEE8 588 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 AGMOQ6ZNB7 445 aa24.51■■□□□ 1.51
R3HDM4-205ENST00000589445 CRIPAKQ8N1N5 446 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms