RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 TAP1Q03518 808 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 PDLIM2Q96JY6 352 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 RAB3IPQ96QF0 476 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 UCHL3P15374 230 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 PMLP29590 882 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 MTF1Q14872 753 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 EFHC2Q5JST6 749 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 GDAP1Q8TB36 358 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 CACYBPQ9HB71 228 aaKnown RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 PPP2R3BQ9Y5P8 575 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 ZKSCAN8Q15776 578 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 ZNF449Q6P9G9 518 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 MYLK4Q86YV6 388 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 SLC4A9Q96Q91 983 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■■□□□ 12.5
PTPRS-206ENST00000588552 PRDM5Q9NQX1 630 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-206ENST00000588552 LCP1P13796 627 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 VCAM1P19320 739 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 PGBD4Q96DM1 585 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 PPP1R9AQ9ULJ8 1098 aa16.5■□□□□ 0.23
PTPRS-206ENST00000588552 IQANK1A0A1B0GTG1 560 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 NR1I3Q14994 352 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 ITIH6Q6UXX5 1313 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 MOXD1Q6UVY6 613 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 PRMT7Q9NVM4 692 aaPredicted RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 GRID2IPA4D2P6 1211 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 PLSCR1O15162 318 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 SART1O43290 800 aaKnown RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 SCP2P22307 547 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 PTPAQ15257 358 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 CNOT10Q9H9A5 744 aaKnown RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 BAIAP2L1Q9UHR4 511 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 TRAPPC3O43617 180 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 SREBF1P36956 1147 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 CPT1AP50416 773 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 ADCY2Q08462 1091 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 TSNAXIP1Q2TAA8 658 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 GNASQ5JWF2 1037 aa16.49■□□□□ 0.23
PTPRS-206ENST00000588552 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 DHX35Q9H5Z1 703 aaKnown RBP16.49■□□□□ 0.23
PTPRS-206ENST00000588552 SHMT1P34896 483 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 HPCAL4Q9UM19 191 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 MOCS2O96007 188 aaPredicted RBP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 GRB10Q13322 594 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 RNF219Q5W0B1 726 aaPredicted RBP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 BTBD8Q5XKL5 378 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 NDUFAF2Q8N183 169 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 IL18RAPO95256 599 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 BCAR1P56945 870 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 SLC18A3Q16572 532 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 CHP1Q99653 195 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 FSD1LQ9BXM9 530 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 RRN3P2A6NIE6 340 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 CYP11B2P19099 503 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 MMEL1Q495T6 779 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 NUF2Q9BZD4 464 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 CHRNA3P32297 505 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 ENGASEQ8NFI3 743 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 DHX38Q92620 1227 aaKnown RBP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 MKNK1Q9BUB5 465 aa16.48■□□□□ 0.23
PTPRS-206ENST00000588552 DDX47Q9H0S4 455 aaKnown RBP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 TTC7AQ9ULT0 858 aaPredicted RBP16.48■□□□□ 0.23
PTPRS-206ENST00000588552 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 EXTL3O43909 919 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 PAMP19021 973 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 MAP3K21Q5TCX8 1036 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 C18orf8Q96DM3 657 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 TRIM62Q9BVG3 475 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 RIOX1Q9H6W3 641 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 TOM1L1O75674 476 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 KRT3P12035 628 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 NFKBIAP25963 317 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
PTPRS-206ENST00000588552 CAV1Q03135 178 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 RBBP5Q15291 538 aaKnown RBP16.47■□□□□ 0.23
PTPRS-206ENST00000588552 HEATR6Q6AI08 1181 aaKnown RBP16.47■□□□□ 0.23
PTPRS-206ENST00000588552 FBXO38Q6PIJ6 1188 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 LMNTD2Q8IXW0 634 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 RUSC1Q9BVN2 902 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 PLAAQ9Y263 795 aa16.47■□□□□ 0.23
PTPRS-206ENST00000588552 GOLGA8MH3BSY2 632 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms