RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SNRNP35Q16560 246 aaKnown RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 DCAF17Q5H9S7 520 aaPredicted RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 MPZL3Q6UWV2 235 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 CRELD2Q6UXH1 353 aaPredicted RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 CATSPER4Q7RTX7 472 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 RSPH3Q86UC2 560 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 FAM126BQ8IXS8 530 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 PLEKHO2Q8TD55 490 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 MSTO1Q9BUK6 570 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 OSBPL7Q9BZF2 842 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 SENP6Q9GZR1 1112 aaPredicted RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 CDT1Q9H211 546 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 M0QZ92 97 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 PES1O00541 588 aaKnown RBP12.32□□□□□ -0.44
VMP1-207ENST00000588131 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
VMP1-207ENST00000588131 MAPK13O15264 365 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 CLDN3O15551 220 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 EXTL3O43909 919 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
VMP1-207ENST00000588131 TPM2P07951 284 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 COL6A1P12109 1028 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 TNFSF9P41273 254 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 ACOT2P49753 483 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 DLG4P78352 724 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 BFSP1Q12934 665 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
VMP1-207ENST00000588131 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 CEP120Q8N960 986 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 TCHPQ9BT92 498 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 NDST4Q9H3R1 872 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
VMP1-207ENST00000588131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
VMP1-207ENST00000588131 CENPFP49454 3210 aa12.32□□□□□ -0.44
VMP1-207ENST00000588131 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 OGTO15294 1046 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 CD4P01730 458 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 AFPP02771 609 aaKnown RBP12.31□□□□□ -0.44
VMP1-207ENST00000588131 TPM3P06753 285 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 SFPQP23246 707 aaKnown RBP eCLIP12.31□□□□□ -0.44
VMP1-207ENST00000588131 HOXA11P31270 313 aaPredicted RBP12.31□□□□□ -0.44
VMP1-207ENST00000588131 KLK7P49862 253 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 ATN1P54259 1190 aaPredicted RBP12.31□□□□□ -0.44
VMP1-207ENST00000588131 WNT7BP56706 349 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 UBXN1Q04323 297 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 CYP24A1Q07973 514 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
VMP1-207ENST00000588131 FAM26DQ5JW98 314 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
VMP1-207ENST00000588131 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
VMP1-207ENST00000588131 ZNF233A6NK53 670 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 MCF2P10911 925 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 CKBP12277 381 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 KRT13P13646 458 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 VAMP7P51809 220 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 MCCD1P59942 119 aaPredicted RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
VMP1-207ENST00000588131 FBXO47Q5MNV8 452 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 THNSL1Q8IYQ7 743 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 CCDC127Q96BQ5 260 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 AGO3Q9H9G7 860 aaKnown RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
VMP1-207ENST00000588131 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
VMP1-207ENST00000588131 A0A1W2PQC6 194 aa12.29□□□□□ -0.44
VMP1-207ENST00000588131 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
VMP1-207ENST00000588131 TULP1O00294 542 aaPredicted RBP12.29□□□□□ -0.44
VMP1-207ENST00000588131 MEFVO15553 781 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms