RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 CCDC192P0DO97 292 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 SFPQP23246 707 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 HOXA9P31269 272 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 TANGO2Q6ICL3 276 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 AGMOQ6ZNB7 445 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 Q6ZS52 159 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 OTUD7AQ8TE49 926 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 IRF7Q92985 503 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 LRIG1Q96JA1 1093 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 GCOM2Q9BZD3 368 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 KRT23Q9C075 422 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 RSAD1Q9HA92 442 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 AGO4Q9HCK5 861 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 RBM12Q9NTZ6 932 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 HCFC1R1Q9NWW0 138 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 GDE1Q9NZC3 331 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 MRPS23Q9Y3D9 190 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 MYH9P35579 1960 aaKnown RBP14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 CACNA1EQ15878 2313 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 LNP1A1A4G5 178 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 CCNE1P24864 410 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 FGD1P98174 961 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 SEC23AQ15436 765 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 UBE2SQ16763 222 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 DEFB124Q8NES8 71 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 RRP36Q96EU6 259 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 TRMT61BQ9BVS5 477 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 LY9Q9HBG7 655 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 TMEM9BQ9NQ34 198 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 C2orf42Q9NWW7 574 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 PCDHB2Q9Y5E7 798 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 WDR81Q562E7 1941 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 APC2O95996 2303 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 COL4A2P08572 1712 aa14.32□□□□□ -0.12
SMARCA4-211ENST00000586921 SPTA1P02549 2419 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 NOTCH4Q99466 2003 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 F8W810 466 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 CAPNS1P04632 268 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 MX1P20591 662 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 HOXC13P31276 330 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 USP41Q3LFD5 358 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 COLGALT2Q8IYK4 626 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 GPR65Q8IYL9 337 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 HNRNPLLQ8WVV9 542 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 ZNF334Q9HCZ1 680 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 PCDHA6Q9UN73 950 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 PCDHA8Q9Y5H6 950 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
SMARCA4-211ENST00000586921 CAVIN2O95810 425 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 PRB1P04280 392 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 PLA2G2AP14555 144 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 ZC3H10Q96K80 434 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 CNNM2Q9H8M5 875 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 ZFP14Q9HCL3 533 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 DNMT3BQ9UBC3 853 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
SMARCA4-211ENST00000586921 ASCC3Q8N3C0 2202 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 NR1I2O75469 434 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 POU2F2P09086 479 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 FCARP24071 287 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 GDI1P31150 447 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 PXNP49023 591 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 CREB5Q02930 508 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 FUT10Q6P4F1 479 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 GPR62Q9BZJ7 368 aa14.29□□□□□ -0.12
SMARCA4-211ENST00000586921 PCNX2A6NKB5 2137 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 AKAP3O75969 853 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 SCAPQ12770 1279 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 SLC5A9Q2M3M2 681 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 UAP1L1Q3KQV9 507 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 PLK5Q496M5 336 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 COLEC11Q9BWP8 271 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 SLC32A1Q9H598 525 aa14.28□□□□□ -0.12
SMARCA4-211ENST00000586921 CFAP46Q8IYW2 2715 aa14.27□□□□□ -0.12
SMARCA4-211ENST00000586921 USP9XQ93008 2570 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 CCDC163A0A0D9SF12 145 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 CEBPBP17676 345 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 PSMC3P17980 439 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 SIM1P81133 766 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 CDC42EP1Q00587 391 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 DSC1Q08554 894 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 ELF2Q15723 593 aa14.27□□□□□ -0.13
SMARCA4-211ENST00000586921 DGKKQ5KSL6 1271 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms