RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DDHD2O94830 711 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 NPTXRO95502 500 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 PRKCBP05771 671 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 GLUD2P49448 558 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 SCNN1GP51170 649 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 DSC1Q08554 894 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 ELAVL2Q12926 359 aaKnown RBP12.42□□□□□ -0.42
ACTN4-209ENST00000586538 AMHR2Q16671 573 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 PDXDC1Q6P996 788 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 C15orf39Q6ZRI6 1047 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 BMP8AQ7Z5Y6 402 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 TMEM173Q86WV6 379 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-209ENST00000586538 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
ACTN4-209ENST00000586538 COLGALT2Q8IYK4 626 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 DRC1Q96MC2 740 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 KIF2CQ99661 725 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 APOL6Q9BWW8 343 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 BHMT2Q9H2M3 363 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 FZD8Q9H461 694 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 NXF3Q9H4D5 531 aaKnown RBP12.42□□□□□ -0.42
ACTN4-209ENST00000586538 C17orf75Q9HAS0 396 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
ACTN4-209ENST00000586538 BMP15O95972 392 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 ZXDAP98168 799 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 RBM10P98175 930 aaKnown RBP12.41□□□□□ -0.42
ACTN4-209ENST00000586538 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 PTGDRQ13258 359 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 DMP1Q13316 513 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-209ENST00000586538 MTMR3Q13615 1198 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 USP41Q3LFD5 358 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 TRIM67Q6ZTA4 783 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 CCDC149Q6ZUS6 474 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
ACTN4-209ENST00000586538 HDAC7Q8WUI4 952 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 STAMQ92783 540 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 ACSF2Q96CM8 615 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-209ENST00000586538 CDK5RAP3Q96JB5 506 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 FBXL18Q96ME1 805 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 GPRC5CQ9NQ84 441 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 KIAA1024Q9UPX6 916 aa12.41□□□□□ -0.42
ACTN4-209ENST00000586538 PRG3Q9Y2Y8 225 aaPredicted RBP12.41□□□□□ -0.42
ACTN4-209ENST00000586538 SF3B1O75533 1304 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■■■■ 47.6
ACTN4-209ENST00000586538 B4GALT5O43286 388 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 SLC26A4O43511 780 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 GLUD1P00367 558 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 SSBP05455 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 THP07101 528 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 CLCN4P51793 760 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 DSG1Q02413 1049 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 TUSC3Q13454 348 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 PTPN21Q16825 1174 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 RARS2Q5T160 578 aaKnown RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 OTOP3Q7RTS5 596 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 UBALD2Q8IYN6 164 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 AUTS2Q8WXX7 1259 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 KLHL5Q96PQ7 755 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 APOL5Q9BWW9 433 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 TOPORSQ9NS56 1045 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 KCND2Q9NZV8 630 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 ADAM28Q9UKQ2 775 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
ACTN4-209ENST00000586538 HES2Q9Y543 173 aa12.4□□□□□ -0.42
ACTN4-209ENST00000586538 H0YCG3 227 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 K7ERI5 159 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 TADA2AO75478 443 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 CNPP09543 421 aaKnown RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 EPCAMP16422 314 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 SCP2P22307 547 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 AKAP5P24588 427 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 FUT10Q6P4F1 479 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 ZDHHC14Q8IZN3 488 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 CMASQ8NFW8 434 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 BCL7CQ8WUZ0 217 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 POMKQ9H5K3 350 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 PDZD7Q9H5P4 517 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 MARCH5Q9NX47 278 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 FNIP2Q9P278 1114 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 SORCS3Q9UPU3 1222 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 PCDHB6Q9Y5E3 794 aa12.39□□□□□ -0.43
ACTN4-209ENST00000586538 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-209ENST00000586538 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 M0R296 226 aa12.38□□□□□ -0.43
ACTN4-209ENST00000586538 C2CD2LO14523 706 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms