RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 GARTP22102 1010 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 MNX1P50219 401 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-204ENST00000586417 VAMP7P51809 220 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 TRIM65Q6PJ69 517 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 CBWD2Q8IUF1 395 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 LRRC71Q8N4P6 559 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 C7orf31Q8N865 590 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 TCP11Q8WWU5 503 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 SAAL1Q96ER3 474 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 TMEM134Q9H6X4 195 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 NHEJ1Q9H9Q4 299 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-204ENST00000586417 SUGCTQ9HAC7 445 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 ARHGAP20Q9P2F6 1191 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 STYXL1Q9Y6J8 313 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 COL1A2P08123 1366 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 A0A0U1RQJ8 604 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 KBTBD13C9JR72 458 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 DNM1LO00429 736 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 EDN1P05305 212 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 SNRNP35Q16560 246 aaKnown RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 MTHFD1LQ6UB35 978 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 CCDC170Q8IYT3 715 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 ATRIPQ8WXE1 791 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 SYN2Q92777 582 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 NUCKS1Q9H1E3 243 aaKnown RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 FBXL5Q9UKA1 691 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 PHF24Q9UPV7 400 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 PHLPP2Q6ZVD8 1323 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 NRCAMQ92823 1304 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 PLEKP08567 350 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 UCHL3P15374 230 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 ADAM17P78536 824 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 STRN3Q13033 797 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 CDCA2Q69YH5 1023 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 PSPC1Q8WXF1 523 aaKnown RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 POMGNT1Q8WZA1 660 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 BICD1Q96G01 975 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 GLT1D1Q96MS3 346 aa22.22■■□□□ 1.15
ATG4D-204ENST00000586417 JPH2Q9BR39 696 aaPredicted RBP22.22■■□□□ 1.15
ATG4D-204ENST00000586417 K7ERI5 159 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 HOXC8P31273 242 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 PPP3CAQ08209 521 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 LAMTOR4Q0VGL1 99 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 FAM47CQ5HY64 1035 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 HGSNATQ68CP4 663 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 EFCAB12Q6NXP0 572 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 METTL13Q8N6R0 699 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 USP20Q9Y2K6 914 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 FHOD1Q9Y613 1164 aa22.21■■□□□ 1.15
ATG4D-204ENST00000586417 TREHO43280 583 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 CABYRO75952 493 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 GJA8P48165 433 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 LIG4P49917 911 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 CLCN3P51790 818 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 ETF1P62495 437 aaKnown RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 MYL7Q01449 175 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 ITGA7Q13683 1181 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 MXD4Q14582 209 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 GDF6Q6KF10 455 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 NFRKBQ6P4R8 1299 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 CCDC113Q9H0I3 377 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 GTF2IRD1Q9UHL9 959 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 AJAP1Q9UKB5 411 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 C17orf102A2RUQ5 167 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 RRN3P2A6NIE6 340 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 EIF3CLB5ME19 914 aaKnown RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 TUBB4AP04350 444 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 CYLC1P35663 651 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 GPD1LQ8N335 351 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 LINC01465Q8N7H1 131 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 MFSD14AQ96MC6 490 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 EIF3CQ99613 913 aaKnown RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 HAPLN2Q9GZV7 340 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 AIPL1Q9NZN9 384 aa22.2■■□□□ 1.14
ATG4D-204ENST00000586417 SUCLA2Q9P2R7 463 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-204ENST00000586417 MBLAC1A4D2B0 266 aaPredicted RBP22.19■■□□□ 1.14
ATG4D-204ENST00000586417 SFMBT2Q5VUG0 894 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 RUFY4Q6ZNE9 571 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 LMO3Q8TAP4 145 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 PARD3BQ8TEW8 1205 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 DIS3LQ8TF46 1054 aaKnown RBP22.19■■□□□ 1.14
ATG4D-204ENST00000586417 PRIMPOLQ96LW4 560 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 INTS2Q9H0H0 1204 aaKnown RBP22.19■■□□□ 1.14
ATG4D-204ENST00000586417 STARD7Q9NQZ5 370 aa22.19■■□□□ 1.14
ATG4D-204ENST00000586417 RBAK-RBAKDNI3L0D1 243 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 FANCGO15287 622 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 PMM2O15305 246 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 P4HA2O15460 535 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 MAGEB2O15479 319 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 ARHGAP25P42331 645 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 EFNA5P52803 228 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 SYT10Q6XYQ8 523 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 GPIHBP1Q8IV16 184 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 ZNF592Q92610 1267 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 TARS2Q9BW92 718 aaKnown RBP22.18■■□□□ 1.14
ATG4D-204ENST00000586417 MYO6Q9UM54 1294 aa22.18■■□□□ 1.14
ATG4D-204ENST00000586417 N4BP1O75113 896 aaKnown RBP22.17■■□□□ 1.14
ATG4D-204ENST00000586417 EIF4A3P38919 411 aaKnown RBP22.17■■□□□ 1.14
ATG4D-204ENST00000586417 GCLMP48507 274 aa22.17■■□□□ 1.14
ATG4D-204ENST00000586417 JAM2P57087 298 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms