RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 MARCKSP29966 332 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 MLH1P40692 756 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 UBA7P41226 1012 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 NUCB2P80303 420 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 PRPF4BQ13523 1007 aaKnown RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 CBX2Q14781 532 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 ATL3Q6DD88 541 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 MRPL17Q9NRX2 175 aaKnown RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 DDX19AQ9NUU7 478 aaKnown RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 CFAP45Q9UL16 551 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 DNM3Q9UQ16 869 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 PRG3Q9Y2Y8 225 aaPredicted RBP20.64■□□□□ 0.89
ATG4D-203ENST00000585752 HES2Q9Y543 173 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 HCFC2Q9Y5Z7 792 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 MYH11P35749 1972 aa20.64■□□□□ 0.89
ATG4D-203ENST00000585752 BRD1O95696 1058 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 KLRC2P26717 231 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 TXLNAP40222 546 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 NAMPTP43490 491 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 ITIH3Q06033 890 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 IL17AQ16552 155 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 APBB1IPQ7Z5R6 666 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-203ENST00000585752 TMEM173Q86WV6 379 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-203ENST00000585752 CDR2LQ86X02 465 aaPredicted RBP20.63■□□□□ 0.89
ATG4D-203ENST00000585752 RNF135Q8IUD6 432 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 VN1R2Q8NFZ6 395 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 AUTS2Q8WXX7 1259 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 KIFAP3Q92845 792 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 CALML4Q96GE6 196 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 COLEC11Q9BWP8 271 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 NT5C3AQ9H0P0 336 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 BHMT2Q9H2M3 363 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 DZANK1Q9NVP4 752 aa20.63■□□□□ 0.89
ATG4D-203ENST00000585752 TFIP11Q9UBB9 837 aaKnown RBP20.63■□□□□ 0.89
ATG4D-203ENST00000585752 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 PP2D1A8MPX8 630 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 PRR33A8MZF0 331 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 B4GALT5O43286 388 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 URODP06132 367 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 AKAP5P24588 427 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 SCNN1GP51170 649 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 SLC39A14Q15043 492 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 KIAA1841Q6NSI8 718 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 ELMSAN1Q6PJG2 1045 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 ZBTB33Q86T24 672 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 CABP7Q86V35 215 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 NECTIN4Q96NY8 510 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 NR2E1Q9Y466 385 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 IRAK3Q9Y616 596 aa20.62■□□□□ 0.89
ATG4D-203ENST00000585752 SPTLC2O15270 562 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 YEATS4O95619 227 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 PRKCBP05771 671 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 CDC25AP30304 524 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 NASPP49321 788 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 AFF1P51825 1210 aaKnown RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 EFNA5P52803 228 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 KCNC3Q14003 757 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 PTPAQ15257 358 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 AMHR2Q16671 573 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 CDCA2Q69YH5 1023 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 SYCE2Q6PIF2 218 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 KRI1Q8N9T8 703 aaKnown RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 RIPOR3Q96MK2 946 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 ZFP42Q96MM3 310 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 NXF3Q9H4D5 531 aaKnown RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 MUTYHQ9UIF7 546 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 SRPRBQ9Y5M8 271 aaKnown RBP20.61■□□□□ 0.89
ATG4D-203ENST00000585752 MUC3AQ02505 3323 aa20.61■□□□□ 0.89
ATG4D-203ENST00000585752 CCDC169A6NNP5 214 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 LOC730098B7Z3J9 87 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 C2CD2LO14523 706 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 SLC26A4O43511 780 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 MTHFRP42898 656 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 KRT85P78386 507 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 FAM187BQ17R55 369 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 ATAT1Q5SQI0 421 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 COLGALT2Q8IYK4 626 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 KCNG4Q8TDN1 519 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 FZD8Q9H461 694 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 KLK14Q9P0G3 267 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 DPP7Q9UHL4 492 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 RAPGEFL1Q9UHV5 662 aa20.6■□□□□ 0.89
ATG4D-203ENST00000585752 K7ERI5 159 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 ACKR2O00590 384 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 SOD2P04179 222 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 DNM1Q05193 864 aaKnown RBP20.59■□□□□ 0.89
ATG4D-203ENST00000585752 GRIK3Q13003 919 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 HERC4Q5GLZ8 1057 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-203ENST00000585752 RARS2Q5T160 578 aaKnown RBP20.59■□□□□ 0.89
ATG4D-203ENST00000585752 LINC00301Q8NCQ3 95 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 BCL7CQ8WUZ0 217 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-203ENST00000585752 SUSD6Q92537 303 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 S1PR5Q9H228 398 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 ADAM7Q9H2U9 754 aa20.59■□□□□ 0.89
ATG4D-203ENST00000585752 CCDC39Q9UFE4 941 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms