RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TBX3O15119 743 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 SLC37A4O43826 429 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 MARCH6O60337 910 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 MGEA5O60502 916 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 ZSCAN20P17040 1043 aaPredicted RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 DNM2P50570 870 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 NOVA1P51513 510 aaKnown RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 GPC3P51654 580 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 PSMC5P62195 406 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 PPP2R5CQ13362 524 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 TARBP2Q15633 366 aaKnown RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 MTERF2Q49AM1 385 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 GTF3C6Q969F1 213 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 JPH2Q9BR39 696 aaPredicted RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 ADAMTS10Q9H324 1103 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.41
CCDC47-206ENST00000584112 ATP6V0A4Q9HBG4 840 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 KCNMB3Q9NPA1 279 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 SHROOM3Q8TF72 1996 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 ACACAQ13085 2346 aa12.46□□□□□ -0.41
CCDC47-206ENST00000584112 HOXA2O43364 376 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 CTDNEP1O95476 244 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 EPCAMP16422 314 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 KRT2P35908 639 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
CCDC47-206ENST00000584112 STARD6P59095 220 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 DSC3Q14574 896 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 UBXN2BQ14CS0 331 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 PTPN14Q15678 1187 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 ME3Q16798 604 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 PIK3AP1Q6ZUJ8 805 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 EXOC8Q8IYI6 725 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 LRIG1Q96JA1 1093 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 RAI2Q9Y5P3 530 aa12.45□□□□□ -0.42
CCDC47-206ENST00000584112 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 BAG4O95429 457 aaKnown RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 DARSP14868 501 aaKnown RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 NEK4P51957 841 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 FAM189BP81408 668 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 SRSF5Q13243 272 aaKnown RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 TRIM29Q14134 588 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 ZNF410Q86VK4 478 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 PROSER1Q86XN7 944 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 CELF5Q8N6W0 485 aaKnown RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 NECAB1Q8N987 351 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 OXER1Q8TDS5 423 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 MRPS27Q92552 414 aaKnown RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 GCOM2Q9BZD3 368 aaPredicted RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 INO80BQ9C086 356 aaPredicted RBP12.44□□□□□ -0.42
CCDC47-206ENST00000584112 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 VAV3Q9UKW4 847 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 APC2O95996 2303 aa12.44□□□□□ -0.42
CCDC47-206ENST00000584112 IGKV6-21A0A0C4DH24 114 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 FAM170BA6NMN3 283 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 STBD1O95210 358 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 P4HBP07237 508 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 FDPSP14324 419 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 CD72P21854 359 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 SFPQP23246 707 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 FAM102BQ5T8I3 360 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 TMC7Q7Z402 723 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 ABI1Q8IZP0 508 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 NSUN7Q8NE18 718 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 HNRNPLLQ8WVV9 542 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 TMEM117Q9H0C3 514 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 NGRNQ9NPE2 291 aaKnown RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 PRMT8Q9NR22 394 aaPredicted RBP12.43□□□□□ -0.42
CCDC47-206ENST00000584112 CHST12Q9NRB3 414 aa12.43□□□□□ -0.42
CCDC47-206ENST00000584112 MYH11P35749 1972 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 EML1O00423 815 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-206ENST00000584112 LARGE1O95461 756 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 FGFR1P11362 822 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 TDGF1P13385 188 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 LAG3P18627 525 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 CA8P35219 290 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 NR5A1Q13285 461 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 SIM2Q14190 667 aaPredicted RBP12.42□□□□□ -0.42
CCDC47-206ENST00000584112 EPHA7Q15375 998 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 ANO5Q75V66 913 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 RHPN2Q8IUC4 686 aa12.42□□□□□ -0.42
CCDC47-206ENST00000584112 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms