RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	ZDHHC9	Q9Y397	364 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	PCDHB13	Q9Y5F0	798 aa		10.86	□□□□□ -0.67
NARF-222	ENST00000583908	MYMK	A6NI61	221 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	CLDN3	O15551	220 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.85	□□□□□ -0.67	2e-7	■■■■■ 30.2
NARF-222	ENST00000583908	OFD1	O75665	1012 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	GCNT3	O95395	438 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	PFKFB1	P16118	471 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	POU3F3	P20264	500 aa	Predicted RBP	10.85	□□□□□ -0.67
NARF-222	ENST00000583908	GRIK3	Q13003	919 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	PDE12	Q6L8Q7	609 aa	Known RBP	10.85	□□□□□ -0.67
NARF-222	ENST00000583908	TMEM87A	Q8NBN3	555 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	LPP	Q93052	612 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	ACO2	Q99798	780 aa	Known RBP	10.85	□□□□□ -0.67
NARF-222	ENST00000583908	RNF39	Q9H2S5	420 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	ST6GALNAC4	Q9H4F1	302 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	TMEM206	Q9H813	350 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	PANK4	Q9NVE7	773 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	KBTBD4	Q9NVX7	518 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	SPG21	Q9NZD8	308 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	TBX20	Q9UMR3	447 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	LZTS1	Q9Y250	596 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	SZT2	Q5T011	3432 aa		10.85	□□□□□ -0.67
NARF-222	ENST00000583908	COL4A4	P53420	1690 aa	Predicted RBP	10.85	□□□□□ -0.67
NARF-222	ENST00000583908	ARL5C	A6NH57	179 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	INPPL1	O15357	1258 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	NCK2	O43639	380 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	ARHGEF15	O94989	841 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SLFN14	P0C7P3	912 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SRGAP2B	P0DMP2	458 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	ATXN8OS	P0DMR3	200 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	HARS	P12081	509 aa	Known RBP	10.84	□□□□□ -0.67
NARF-222	ENST00000583908	GRM5	P41594	1212 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	GATM	P50440	423 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SKIV2L	Q15477	1246 aa	Known RBP	10.84	□□□□□ -0.67
NARF-222	ENST00000583908	E2F4	Q16254	413 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	LONRF3	Q496Y0	759 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SLFN12L	Q6IEE8	588 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	KANK3	Q6NY19	840 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	CNNM4	Q6P4Q7	775 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	KCNT2	Q6UVM3	1135 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	AGMO	Q6ZNB7	445 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SFR1	Q86XK3	245 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	MAP4K3	Q8IVH8	894 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SYCP3	Q8IZU3	236 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	FSIP1	Q8NA03	581 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	KLHL23	Q8NBE8	558 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SMG8	Q8ND04	991 aa	Known RBP	10.84	□□□□□ -0.67
NARF-222	ENST00000583908	ACCS	Q96QU6	501 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	TARS2	Q9BW92	718 aa	Known RBP	10.84	□□□□□ -0.67
NARF-222	ENST00000583908	TRIM9	Q9C026	710 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	GBP3	Q9H0R5	595 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	NSUN3	Q9H649	340 aa	Known RBP	10.84	□□□□□ -0.67
NARF-222	ENST00000583908	POLD4	Q9HCU8	107 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	SLC38A7	Q9NVC3	462 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	TBC1D13	Q9NVG8	400 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	HES2	Q9Y543	173 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	UBE4B	O95155	1302 aa		10.84	□□□□□ -0.67
NARF-222	ENST00000583908	CDH23	Q9H251	3354 aa		10.83	□□□□□ -0.67
NARF-222	ENST00000583908	LAMA2	P24043	3122 aa	Known RBP	10.83	□□□□□ -0.68
NARF-222	ENST00000583908		A0A087X0B3	334 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	FRMD3	A2A2Y4	597 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	XPOT	O43592	962 aa	Known RBP	10.83	□□□□□ -0.68
NARF-222	ENST00000583908	FGF18	O76093	207 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	RECQL4	O94761	1208 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	KIF20A	O95235	890 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	PIGR	P01833	764 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	ALDH2	P05091	517 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	TH	P07101	528 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	AKAP5	P24588	427 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	BCAR1	P56945	870 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	GTF2B	Q00403	316 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	PLCB3	Q01970	1234 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	MCL1	Q07820	350 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	POSTN	Q15063	836 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	NT5DC1	Q5TFE4	455 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	UNC13D	Q70J99	1090 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	CDR2L	Q86X02	465 aa	Predicted RBP	10.83	□□□□□ -0.68
NARF-222	ENST00000583908	POF1B	Q8WVV4	589 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	UROC1	Q96N76	676 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	ACAP3	Q96P50	834 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	GAD1	Q99259	594 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	C7orf25	Q9BPX7	421 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	CDT1	Q9H211	546 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	CWH43	Q9H720	699 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	ENTPD7	Q9NQZ7	604 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	TLR9	Q9NR96	1032 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	RNF19A	Q9NV58	838 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	EXOC1	Q9NV70	894 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	SNTG2	Q9NY99	539 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	PLAGL2	Q9UPG8	496 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	SSX2IP	Q9Y2D8	614 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	MTCH2	Q9Y6C9	303 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	MYH11	P35749	1972 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908	NLRC5	Q86WI3	1866 aa		10.83	□□□□□ -0.68
NARF-222	ENST00000583908		A0A1B0GVL5	298 aa		10.82	□□□□□ -0.68
NARF-222	ENST00000583908	PVALEF	A0A1B0GWK0	134 aa		10.82	□□□□□ -0.68
NARF-222	ENST00000583908	EPOP	A6NHQ4	379 aa		10.82	□□□□□ -0.68
NARF-222	ENST00000583908	KIAA0391	O15091	583 aa	Known RBP	10.82	□□□□□ -0.68
NARF-222	ENST00000583908	EIF3D	O15371	548 aa	Known RBP eCLIP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms