RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 FAM81BQ96LP2 452 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 FDXACB1Q9BRP7 624 aaPredicted RBP10.05□□□□□ -0.8
CASC3-209ENST00000583902 TUBGCP2Q9BSJ2 902 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 FGFBP2Q9BYJ0 223 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 PTPRHQ9HD43 1115 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 SAMSN1Q9NSI8 373 aaKnown RBP10.05□□□□□ -0.8
CASC3-209ENST00000583902 HSPBP1Q9NZL4 362 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 IMPACTQ9P2X3 320 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 GRIN2DO15399 1336 aa10.05□□□□□ -0.8
CASC3-209ENST00000583902 LGALS16A8MUM7 142 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 OGTO15294 1046 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 IL18RAPO95256 599 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 VTNP04004 478 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 COL6A1P12109 1028 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 RAB27AP51159 221 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 SOX10P56693 466 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 CHMP4BP1P59074 171 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 KCNA1Q09470 495 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 NR1I3Q14994 352 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 KRT31Q15323 416 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 TMEM132AQ24JP5 1023 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 TAS1R3Q7RTX0 852 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 CATSPER4Q7RTX7 472 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 IRF2BP1Q8IU81 584 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 TRIM59Q8IWR1 403 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 FAM186BQ8IYM0 893 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 GLIS3Q8NEA6 775 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 MFSD14AQ96MC6 490 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 MSTO1Q9BUK6 570 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 NOC4LQ9BVI4 516 aaKnown RBP10.04□□□□□ -0.8
CASC3-209ENST00000583902 FTHL17Q9BXU8 183 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 EDEM3Q9BZQ6 932 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
CASC3-209ENST00000583902 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
CASC3-209ENST00000583902 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 AGPAT5Q9NUQ2 364 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 AGO2Q9UKV8 859 aaKnown RBP10.04□□□□□ -0.8
CASC3-209ENST00000583902 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASC3-209ENST00000583902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.04□□□□□ -0.8
CASC3-209ENST00000583902 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 CITO14578 2027 aa10.04□□□□□ -0.8
CASC3-209ENST00000583902 SNPHO15079 494 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 CD4P01730 458 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 TPM1P09493 284 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 ADSSP30520 456 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 THPOP40225 353 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
CASC3-209ENST00000583902 CLDN10P78369 228 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 BFSP1Q12934 665 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 SNRNP35Q16560 246 aaKnown RBP10.03□□□□□ -0.8
CASC3-209ENST00000583902 AMHR2Q16671 573 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 VWA3BQ502W6 1294 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 SLC27A1Q6PCB7 646 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 SLC39A5Q6ZMH5 540 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 RUFY4Q6ZNE9 571 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 NECAB2Q7Z6G3 386 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 FAM126BQ8IXS8 530 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 APBB2Q92870 758 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 FAXDC2Q96IV6 333 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 ERGIC2Q96RQ1 377 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 KIFC3Q9BVG8 833 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 TARS2Q9BW92 718 aaKnown RBP10.03□□□□□ -0.8
CASC3-209ENST00000583902 NDST4Q9H3R1 872 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 ASB7Q9H672 318 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 POLD4Q9HCU8 107 aa10.03□□□□□ -0.8
CASC3-209ENST00000583902 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
CASC3-209ENST00000583902 CLIC2O15247 247 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 NRDCO43847 1150 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 TSPAN1O60635 241 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 AKAP3O75969 853 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 ADCY5O95622 1261 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 CLTAP09496 248 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 SELPP16109 830 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 ZSCAN20P17040 1043 aaPredicted RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 ARF4P18085 180 aaPredicted RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 RFX1P22670 979 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 RFC2P35250 354 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 MATR3P43243 847 aaKnown RBP eCLIP10.02□□□□□ -0.81
CASC3-209ENST00000583902 CYP2J2P51589 502 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 ZNF75DP51815 510 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 GSDMDP57764 484 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 MGAT3Q09327 533 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 PSMD6Q15008 389 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 TRIM71Q2Q1W2 868 aaKnown RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 FIGNQ5HY92 759 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 SPECC1LQ69YQ0 1117 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 APTXQ7Z2E3 356 aaKnown RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 EFCAB3Q8N7B9 438 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 CACTINQ8WUQ7 758 aaKnown RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 PDLIM2Q96JY6 352 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms