RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 ATP8B4Q8TF62 1192 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 hCG_1984214I3L0E3 225 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 KIAA0391O15091 583 aaKnown RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 RIPK2O43353 540 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 GJB6O95452 261 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 KITP10721 976 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 ZFPM1Q8IX07 1006 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 ZBED8Q8IZ13 594 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 ZNF713Q8N859 430 aaPredicted RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 ARMC2Q8NEN0 867 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 ZSWIM1Q9BR11 485 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 TEKT3Q9BXF9 490 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 AGPAT3Q9NRZ7 376 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 ANKFY1Q9P2R3 1169 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 USH1CQ9Y6N9 552 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 NID2Q14112 1375 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 BCL9O00512 1426 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 CFAP73A6NFT4 308 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 EYA4O95677 639 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 LIN9Q5TKA1 542 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
RNF43-207ENST00000583753 CCT6BQ92526 530 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 CSRNP1Q96S65 589 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 UBN1Q9NPG3 1134 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 CHST7Q9NS84 486 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 C1orf112Q9NSG2 853 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 AGAP1Q9UPQ3 857 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 ARHGAP42A6NI28 874 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 TROVE2P10155 538 aaKnown RBP eCLIP11.29□□□□□ -0.6
RNF43-207ENST00000583753 CHKAP35790 457 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 LRRC36Q1X8D7 754 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 BSPRYQ5W0U4 402 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 MAML1Q92585 1016 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 GINM1Q9NU53 330 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 TXLNGQ9NUQ3 528 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 PCDHB4Q9Y5E5 795 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 SLIT3O75094 1523 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 CBX6O95503 412 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 KRT10P13645 584 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 HSPA6P17066 643 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 YWHAGP61981 247 aaKnown RBP eCLIP11.29□□□□□ -0.6
RNF43-207ENST00000583753 NOP14P78316 857 aaKnown RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 GPS1Q13098 491 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 C6orf163Q5TEZ5 329 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 XXYLT1Q8NBI6 393 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 RBM15Q96T37 977 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■■■□□ 15.2
RNF43-207ENST00000583753 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
RNF43-207ENST00000583753 C15orf41Q9Y2V0 281 aa11.29□□□□□ -0.6
RNF43-207ENST00000583753 MAPK13O15264 365 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 FOSP01100 380 aaPredicted RBP11.28□□□□□ -0.6
RNF43-207ENST00000583753 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 P3H1Q32P28 736 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 PHLDB3Q6NSJ2 640 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ZFP69BQ9UJL9 534 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 COG5Q9UP83 839 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 CCDC195A0A1B0GUA6 201 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
RNF43-207ENST00000583753 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 NDUFB10O96000 172 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 KRT1P04264 644 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 PSEN1P49768 467 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 NPEPPSP55786 919 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
RNF43-207ENST00000583753 CNGA2Q16280 664 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 GRK7Q8WTQ7 553 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 P3H4Q92791 437 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ZNF668Q96K58 619 aaPredicted RBP11.28□□□□□ -0.6
RNF43-207ENST00000583753 C10orf88Q9H8K7 445 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.61e-5■□□□□ 9.2
RNF43-207ENST00000583753 RAB20Q9NX57 234 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 RBAK-RBAKDNI3L0D1 243 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 SNX3O60493 162 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 RALAP11233 206 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 SOX10P56693 466 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 DDR1Q08345 913 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 CRYMQ14894 314 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms