RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 HADHBP55084 474 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 FAM47CQ5HY64 1035 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 SRRM1Q8IYB3 904 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZC3H15Q8WU90 426 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 ZSWIM1Q9BR11 485 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 LRRC1Q9BTT6 524 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
RTTN-209ENST00000583043 AGO2Q9UKV8 859 aaKnown RBP6.25□□□□□ -1.41
RTTN-209ENST00000583043 CDH16O75309 829 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KRT1P04264 644 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 EIF2AK2P19525 551 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 SLC12A3P55017 1021 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KIF22Q14807 665 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SNRNP35Q16560 246 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 MIIPQ5JXC2 388 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ANKRD20A3Q5VUR7 823 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SNRNP48Q6IEG0 339 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 MMS22LQ6ZRQ5 1243 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.24□□□□□ -1.41
RTTN-209ENST00000583043 ARMCX2Q7L311 632 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 LRRC8CQ8TDW0 803 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SERPINB12Q96P63 405 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 NUP85Q9BW27 656 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 TRIM31Q9BZY9 425 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KCNH7Q9NS40 1196 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CACNB1Q02641 598 aaPredicted RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 TTLL4Q14679 1199 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PCBP1Q15365 356 aaKnown RBP eCLIP6.24□□□□□ -1.41
RTTN-209ENST00000583043 CCDC6Q16204 474 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 GLYCTKQ8IVS8 523 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SLC35G2Q8TBE7 412 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PIGOQ8TEQ8 1089 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SEPT1Q8WYJ6 367 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CHMP6Q96FZ7 201 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ATP5BP06576 529 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 CYP2C8P10632 490 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KLRC1P26715 233 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CCT5P48643 541 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 MAP7Q14244 749 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KRT81Q14533 505 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 OTOP1Q7RTM1 612 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 YTHDF3Q7Z739 585 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 CENPTQ96BT3 561 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ANKRD27Q96NW4 1050 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 WDR18Q9BV38 432 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 POLR3FQ9H1D9 316 aaPredicted RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 SPC25Q9HBM1 224 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PFDN4Q9NQP4 134 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 TBX20Q9UMR3 447 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ATP8A1Q9Y2Q0 1164 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CD2APQ9Y5K6 639 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 F8VZ95 297 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 MYO1CO00159 1063 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SRGAP2BP0DMP2 458 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PAX3P23760 479 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SPARCL1Q14515 664 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ACAP1Q15027 740 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 SNCBQ16143 134 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PHLDB3Q6NSJ2 640 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PAPPAQ13219 1627 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 KRT37O76014 449 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 FAM107AO95990 144 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 GCLMP48507 274 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 GPC3P51654 580 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ZNF131P52739 623 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 LRRC38Q5VT99 294 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ATG16L1Q676U5 607 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ACAD10Q6JQN1 1059 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CCDC137Q6PK04 289 aaKnown RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 PHLDB2Q86SQ0 1253 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 NLRP14Q86W24 1093 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 STMN2Q93045 179 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 GPR101Q96P66 508 aaPredicted RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 TRIM6Q9C030 488 aaPredicted RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 TTYH3Q9C0H2 523 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 CPVLQ9H3G5 476 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 PRMT7Q9NVM4 692 aaPredicted RBP6.24□□□□□ -1.41
RTTN-209ENST00000583043 GABBR1Q9UBS5 961 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 ANAPC7Q9UJX3 599 aa6.24□□□□□ -1.41
RTTN-209ENST00000583043 A6NJR5 290 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 C21orf2O43822 256 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 PSMD10O75832 226 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 RAD17O75943 681 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 GSTA1P08263 222 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 SETSIPP0DME0 302 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 GNAT1P11488 350 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 RARGP13631 454 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
RTTN-209ENST00000583043 PTENP60484 403 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 ZCWPW2Q504Y3 356 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 CDKL3Q8IVW4 592 aaPredicted RBP6.23□□□□□ -1.41
RTTN-209ENST00000583043 ATP11CQ8NB49 1132 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 ETNPPLQ8TBG4 499 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 SENP7Q9BQF6 1050 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 PABPC3Q9H361 631 aaKnown RBP6.23□□□□□ -1.41
RTTN-209ENST00000583043 SMARCAD1Q9H4L7 1026 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 CYP3A43Q9HB55 503 aa6.23□□□□□ -1.41
RTTN-209ENST00000583043 PPANQ9NQ55 473 aaKnown RBP6.23□□□□□ -1.41
RTTN-209ENST00000583043 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms